Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 TSPY6P-201ENST00000448518 926 ntBASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 AF106564.1-201ENST00000607058 2553 ntBASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 AC005229.4-201ENST00000610085 2198 ntBASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 AC016405.3-201ENST00000607710 860 ntBASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
CHMP1BQ7LBR1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 AC244015.2-201ENST00000616358 1861 ntBASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 AL512625.2-201ENST00000417533 625 ntBASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.6■□□□□ 0.57
CHMP1BQ7LBR1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 AC091799.1-201ENST00000422823 811 ntBASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 AC007322.3-201ENST00000426526 701 ntBASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 RARRES2P4-201ENST00000514074 484 ntBASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP1BQ7LBR1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
CHMP1BQ7LBR1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.58■□□□□ 0.57
CHMP1BQ7LBR1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP1BQ7LBR1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP1BQ7LBR1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CHMP1BQ7LBR1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP1BQ7LBR1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.58■□□□□ 0.56
CHMP1BQ7LBR1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.58■□□□□ 0.56
CHMP1BQ7LBR1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.58■□□□□ 0.56
CHMP1BQ7LBR1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CHMP1BQ7LBR1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP1BQ7LBR1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CHMP1BQ7LBR1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP1BQ7LBR1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
CHMP1BQ7LBR1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CHMP1BQ7LBR1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP1BQ7LBR1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP1BQ7LBR1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CHMP1BQ7LBR1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP1BQ7LBR1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms