Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PACS1Q6VY07 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PACS1Q6VY07 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PACS1Q6VY07 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PACS1Q6VY07 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
PACS1Q6VY07 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.46■□□□□ 0.87
PACS1Q6VY07 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.46■□□□□ 0.87
PACS1Q6VY07 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.46■□□□□ 0.87
PACS1Q6VY07 AC007322.4-201ENST00000509611 723 ntBASIC20.46■□□□□ 0.87
PACS1Q6VY07 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.46■□□□□ 0.87
PACS1Q6VY07 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PACS1Q6VY07 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.46■□□□□ 0.87
PACS1Q6VY07 AC092437.1-201ENST00000624794 1048 ntBASIC20.46■□□□□ 0.87
PACS1Q6VY07 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
PACS1Q6VY07 AC116050.2-201ENST00000612102 1779 ntBASIC20.46■□□□□ 0.87
PACS1Q6VY07 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PACS1Q6VY07 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.87
PACS1Q6VY07 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
PACS1Q6VY07 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PACS1Q6VY07 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PACS1Q6VY07 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PACS1Q6VY07 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PACS1Q6VY07 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.45■□□□□ 0.86
PACS1Q6VY07 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PACS1Q6VY07 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PACS1Q6VY07 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.45■□□□□ 0.86
PACS1Q6VY07 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PACS1Q6VY07 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PACS1Q6VY07 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.45■□□□□ 0.86
PACS1Q6VY07 AC011767.1-201ENST00000617410 1153 ntBASIC20.45■□□□□ 0.86
PACS1Q6VY07 BID-214ENST00000617586 542 ntTSL 5 BASIC20.45■□□□□ 0.86
PACS1Q6VY07 AC013268.1-206ENST00000638368 961 ntBASIC20.45■□□□□ 0.86
PACS1Q6VY07 AC112229.1-201ENST00000639295 961 ntBASIC20.45■□□□□ 0.86
PACS1Q6VY07 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
PACS1Q6VY07 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PACS1Q6VY07 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.45■□□□□ 0.86
PACS1Q6VY07 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.45■□□□□ 0.86
PACS1Q6VY07 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PACS1Q6VY07 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PACS1Q6VY07 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.44■□□□□ 0.86
PACS1Q6VY07 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PACS1Q6VY07 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PACS1Q6VY07 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
PACS1Q6VY07 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.44■□□□□ 0.86
PACS1Q6VY07 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PACS1Q6VY07 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.44■□□□□ 0.86
PACS1Q6VY07 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PACS1Q6VY07 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PACS1Q6VY07 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PACS1Q6VY07 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
PACS1Q6VY07 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PACS1Q6VY07 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PACS1Q6VY07 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PACS1Q6VY07 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PACS1Q6VY07 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PACS1Q6VY07 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PACS1Q6VY07 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.43■□□□□ 0.86
PACS1Q6VY07 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PACS1Q6VY07 DUX4L16-201ENST00000555130 1264 ntBASIC20.43■□□□□ 0.86
PACS1Q6VY07 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.43■□□□□ 0.86
PACS1Q6VY07 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PACS1Q6VY07 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.43■□□□□ 0.86
PACS1Q6VY07 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PACS1Q6VY07 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PACS1Q6VY07 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.43■□□□□ 0.86
PACS1Q6VY07 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PACS1Q6VY07 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PACS1Q6VY07 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.43■□□□□ 0.86
PACS1Q6VY07 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
PACS1Q6VY07 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.43■□□□□ 0.86
PACS1Q6VY07 TCF3P1-201ENST00000423021 1937 ntBASIC20.43■□□□□ 0.86
PACS1Q6VY07 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PACS1Q6VY07 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PACS1Q6VY07 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PACS1Q6VY07 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PACS1Q6VY07 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PACS1Q6VY07 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.42■□□□□ 0.86
PACS1Q6VY07 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PACS1Q6VY07 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PACS1Q6VY07 AL162412.1-201ENST00000567129 965 ntBASIC20.42■□□□□ 0.86
PACS1Q6VY07 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.42■□□□□ 0.86
PACS1Q6VY07 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.42■□□□□ 0.86
PACS1Q6VY07 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.42■□□□□ 0.86
PACS1Q6VY07 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PACS1Q6VY07 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PACS1Q6VY07 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PACS1Q6VY07 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.41■□□□□ 0.86
PACS1Q6VY07 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.41■□□□□ 0.86
PACS1Q6VY07 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PACS1Q6VY07 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PACS1Q6VY07 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.41■□□□□ 0.86
PACS1Q6VY07 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PACS1Q6VY07 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.41■□□□□ 0.86
PACS1Q6VY07 CNN2P6-201ENST00000439038 900 ntBASIC20.41■□□□□ 0.86
PACS1Q6VY07 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PACS1Q6VY07 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.41■□□□□ 0.86
PACS1Q6VY07 IKBKGP1-201ENST00000612193 1073 ntBASIC20.41■□□□□ 0.86
PACS1Q6VY07 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PACS1Q6VY07 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PACS1Q6VY07 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms