Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 RBM17P1-201ENST00000453646 1190 ntBASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 NUDT16P1-203ENST00000513809 620 ntBASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 AC004264.1-201ENST00000608354 794 ntBASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.96■■□□□ 1.11
CNKSR3Q6P9H4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
CNKSR3Q6P9H4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.11
CNKSR3Q6P9H4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 AC005363.2-201ENST00000618631 242 ntBASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.95■■□□□ 1.1
CNKSR3Q6P9H4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 UNC93B2-201ENST00000285383 730 ntBASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 ARMC10P1-201ENST00000313754 855 ntBASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 AL049597.2-201ENST00000565575 961 ntBASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.94■■□□□ 1.1
CNKSR3Q6P9H4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 KRT8P36-201ENST00000489121 1440 ntBASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 AP002982.1-201ENST00000492365 877 ntBASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 AC079598.2-202ENST00000546624 1451 ntBASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 REXO1L10P-201ENST00000615707 1290 ntBASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 AL590326.2-201ENST00000625139 305 ntBASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.93■■□□□ 1.1
CNKSR3Q6P9H4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CNKSR3Q6P9H4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 AP000525.1-201ENST00000608286 694 ntBASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 AC027702.1-201ENST00000563810 1770 ntBASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR3Q6P9H4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR3Q6P9H4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR3Q6P9H4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR3Q6P9H4 KRT8P9-201ENST00000558927 1449 ntBASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms