Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC005521.1-201ENST00000393351 872 ntBASIC25.75■■□□□ 1.71
RC3H1Q5TC82 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
RC3H1Q5TC82 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC25.75■■□□□ 1.71
RC3H1Q5TC82 TPM1-226ENST00000560959 925 ntTSL 2 BASIC25.75■■□□□ 1.71
RC3H1Q5TC82 AC004264.1-201ENST00000608354 794 ntBASIC25.75■■□□□ 1.71
RC3H1Q5TC82 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RC3H1Q5TC82 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RC3H1Q5TC82 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RC3H1Q5TC82 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RC3H1Q5TC82 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RC3H1Q5TC82 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RC3H1Q5TC82 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RC3H1Q5TC82 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC25.74■■□□□ 1.71
RC3H1Q5TC82 PNN-205ENST00000556530 601 ntTSL 2 BASIC25.74■■□□□ 1.71
RC3H1Q5TC82 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25.74■■□□□ 1.71
RC3H1Q5TC82 AP000525.1-201ENST00000608286 694 ntBASIC25.74■■□□□ 1.71
RC3H1Q5TC82 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
RC3H1Q5TC82 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
RC3H1Q5TC82 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
RC3H1Q5TC82 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RC3H1Q5TC82 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC25.73■■□□□ 1.71
RC3H1Q5TC82 AC116562.2-201ENST00000507042 360 ntBASIC25.73■■□□□ 1.71
RC3H1Q5TC82 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC25.73■■□□□ 1.71
RC3H1Q5TC82 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RC3H1Q5TC82 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.73■■□□□ 1.71
RC3H1Q5TC82 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RC3H1Q5TC82 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.73■■□□□ 1.71
RC3H1Q5TC82 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
RC3H1Q5TC82 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RC3H1Q5TC82 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RC3H1Q5TC82 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC25.72■■□□□ 1.71
RC3H1Q5TC82 AC027702.1-201ENST00000563810 1770 ntBASIC25.72■■□□□ 1.71
RC3H1Q5TC82 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
RC3H1Q5TC82 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
RC3H1Q5TC82 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25.72■■□□□ 1.71
RC3H1Q5TC82 AP002982.1-201ENST00000492365 877 ntBASIC25.72■■□□□ 1.71
RC3H1Q5TC82 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.72■■□□□ 1.71
RC3H1Q5TC82 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC25.72■■□□□ 1.71
RC3H1Q5TC82 AL031963.3-201ENST00000606441 850 ntBASIC25.72■■□□□ 1.71
RC3H1Q5TC82 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RC3H1Q5TC82 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RC3H1Q5TC82 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
RC3H1Q5TC82 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RC3H1Q5TC82 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RC3H1Q5TC82 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RC3H1Q5TC82 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.71■■□□□ 1.71
RC3H1Q5TC82 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RC3H1Q5TC82 AC113347.1-201ENST00000413321 391 ntBASIC25.71■■□□□ 1.71
RC3H1Q5TC82 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC25.71■■□□□ 1.71
RC3H1Q5TC82 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.71■■□□□ 1.71
RC3H1Q5TC82 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RC3H1Q5TC82 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RC3H1Q5TC82 MIR1238-201ENST00000408483 83 ntBASIC25.7■■□□□ 1.7
RC3H1Q5TC82 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.7■■□□□ 1.7
RC3H1Q5TC82 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.7■■□□□ 1.7
RC3H1Q5TC82 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC25.7■■□□□ 1.7
RC3H1Q5TC82 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RC3H1Q5TC82 FITM1-202ENST00000559294 800 ntBASIC25.7■■□□□ 1.7
RC3H1Q5TC82 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RC3H1Q5TC82 MIR2861-201ENST00000636310 90 ntBASIC25.7■■□□□ 1.7
RC3H1Q5TC82 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.7■■□□□ 1.7
RC3H1Q5TC82 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RC3H1Q5TC82 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.7■■□□□ 1.7
RC3H1Q5TC82 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RC3H1Q5TC82 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RC3H1Q5TC82 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RC3H1Q5TC82 LINC01568-207ENST00000641790 1380 ntBASIC25.69■■□□□ 1.7
RC3H1Q5TC82 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RC3H1Q5TC82 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RC3H1Q5TC82 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RC3H1Q5TC82 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.69■■□□□ 1.7
RC3H1Q5TC82 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RC3H1Q5TC82 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC25.69■■□□□ 1.7
RC3H1Q5TC82 DUT-205ENST00000558813 769 ntTSL 2 BASIC25.69■■□□□ 1.7
RC3H1Q5TC82 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC25.69■■□□□ 1.7
RC3H1Q5TC82 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
RC3H1Q5TC82 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
RC3H1Q5TC82 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RC3H1Q5TC82 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RC3H1Q5TC82 AC073508.3-201ENST00000619697 1419 ntBASIC25.69■■□□□ 1.7
RC3H1Q5TC82 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.69■■□□□ 1.7
RC3H1Q5TC82 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
RC3H1Q5TC82 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
RC3H1Q5TC82 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC25.68■■□□□ 1.7
RC3H1Q5TC82 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RC3H1Q5TC82 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC25.68■■□□□ 1.7
RC3H1Q5TC82 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC25.68■■□□□ 1.7
RC3H1Q5TC82 NME3-204ENST00000563498 920 ntTSL 2 BASIC25.68■■□□□ 1.7
RC3H1Q5TC82 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
RC3H1Q5TC82 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.68■■□□□ 1.7
RC3H1Q5TC82 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RC3H1Q5TC82 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RC3H1Q5TC82 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC25.68■■□□□ 1.7
RC3H1Q5TC82 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 CYP2D8P-201ENST00000433633 1490 ntBASIC25.67■■□□□ 1.7
RC3H1Q5TC82 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms