Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.54■■□□□ 1.04
VARS2Q5ST30 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VARS2Q5ST30 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.54■■□□□ 1.04
VARS2Q5ST30 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VARS2Q5ST30 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
VARS2Q5ST30 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VARS2Q5ST30 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.54■■□□□ 1.04
VARS2Q5ST30 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
VARS2Q5ST30 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
VARS2Q5ST30 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.54■■□□□ 1.04
VARS2Q5ST30 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VARS2Q5ST30 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
VARS2Q5ST30 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.54■■□□□ 1.04
VARS2Q5ST30 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.54■■□□□ 1.04
VARS2Q5ST30 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VARS2Q5ST30 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VARS2Q5ST30 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.54■■□□□ 1.04
VARS2Q5ST30 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VARS2Q5ST30 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
VARS2Q5ST30 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.54■■□□□ 1.04
VARS2Q5ST30 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
VARS2Q5ST30 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VARS2Q5ST30 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VARS2Q5ST30 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.53■■□□□ 1.04
VARS2Q5ST30 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.53■■□□□ 1.04
VARS2Q5ST30 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.53■■□□□ 1.04
VARS2Q5ST30 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VARS2Q5ST30 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VARS2Q5ST30 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.53■■□□□ 1.04
VARS2Q5ST30 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
VARS2Q5ST30 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.53■■□□□ 1.04
VARS2Q5ST30 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.53■■□□□ 1.04
VARS2Q5ST30 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.53■■□□□ 1.04
VARS2Q5ST30 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VARS2Q5ST30 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.53■■□□□ 1.04
VARS2Q5ST30 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VARS2Q5ST30 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.53■■□□□ 1.04
VARS2Q5ST30 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.53■■□□□ 1.04
VARS2Q5ST30 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.53■■□□□ 1.04
VARS2Q5ST30 AF106564.1-201ENST00000607058 2553 ntBASIC21.53■■□□□ 1.04
VARS2Q5ST30 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VARS2Q5ST30 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
VARS2Q5ST30 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VARS2Q5ST30 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VARS2Q5ST30 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
VARS2Q5ST30 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
VARS2Q5ST30 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VARS2Q5ST30 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
VARS2Q5ST30 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
VARS2Q5ST30 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.52■■□□□ 1.04
VARS2Q5ST30 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.52■■□□□ 1.04
VARS2Q5ST30 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VARS2Q5ST30 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
VARS2Q5ST30 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.52■■□□□ 1.04
VARS2Q5ST30 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VARS2Q5ST30 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
VARS2Q5ST30 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VARS2Q5ST30 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VARS2Q5ST30 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VARS2Q5ST30 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
VARS2Q5ST30 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.52■■□□□ 1.03
VARS2Q5ST30 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
VARS2Q5ST30 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
VARS2Q5ST30 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VARS2Q5ST30 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
VARS2Q5ST30 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VARS2Q5ST30 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VARS2Q5ST30 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VARS2Q5ST30 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.51■■□□□ 1.03
VARS2Q5ST30 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VARS2Q5ST30 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
VARS2Q5ST30 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VARS2Q5ST30 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VARS2Q5ST30 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VARS2Q5ST30 LINC00565-201ENST00000562710 2331 ntBASIC21.51■■□□□ 1.03
VARS2Q5ST30 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
VARS2Q5ST30 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VARS2Q5ST30 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VARS2Q5ST30 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VARS2Q5ST30 PLK5-205ENST00000642079 1969 ntBASIC21.5■■□□□ 1.03
VARS2Q5ST30 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VARS2Q5ST30 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VARS2Q5ST30 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
VARS2Q5ST30 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VARS2Q5ST30 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VARS2Q5ST30 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
VARS2Q5ST30 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VARS2Q5ST30 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.5■■□□□ 1.03
VARS2Q5ST30 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.5■■□□□ 1.03
VARS2Q5ST30 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.5■■□□□ 1.03
VARS2Q5ST30 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
VARS2Q5ST30 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
VARS2Q5ST30 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.5■■□□□ 1.03
VARS2Q5ST30 AL023875.1-201ENST00000640777 796 ntBASIC21.5■■□□□ 1.03
VARS2Q5ST30 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
VARS2Q5ST30 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VARS2Q5ST30 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.5■■□□□ 1.03
VARS2Q5ST30 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
VARS2Q5ST30 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VARS2Q5ST30 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms