Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KHDC1Q4VXA5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KHDC1Q4VXA5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 AC073314.1-201ENST00000568729 2216 ntBASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.46■□□□□ 0.87
KHDC1Q4VXA5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.87
KHDC1Q4VXA5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.45■□□□□ 0.86
KHDC1Q4VXA5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 NCF1B-203ENST00000435988 1254 ntBASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.44■□□□□ 0.86
KHDC1Q4VXA5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KHDC1Q4VXA5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms