Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYPL1Q16563 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYPL1Q16563 KRT18P5-201ENST00000436075 1291 ntBASIC18.86■□□□□ 0.61
SYPL1Q16563 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYPL1Q16563 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYPL1Q16563 AC137761.2-201ENST00000561729 223 ntBASIC18.86■□□□□ 0.61
SYPL1Q16563 AC145350.3-201ENST00000569033 163 ntBASIC18.86■□□□□ 0.61
SYPL1Q16563 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.86■□□□□ 0.61
SYPL1Q16563 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
SYPL1Q16563 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYPL1Q16563 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYPL1Q16563 TCF3P1-201ENST00000423021 1937 ntBASIC18.86■□□□□ 0.61
SYPL1Q16563 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SYPL1Q16563 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.85■□□□□ 0.61
SYPL1Q16563 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.85■□□□□ 0.61
SYPL1Q16563 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.85■□□□□ 0.61
SYPL1Q16563 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.85■□□□□ 0.61
SYPL1Q16563 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYPL1Q16563 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYPL1Q16563 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYPL1Q16563 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SYPL1Q16563 AL591742.1-201ENST00000604433 565 ntBASIC18.85■□□□□ 0.61
SYPL1Q16563 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYPL1Q16563 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.85■□□□□ 0.61
SYPL1Q16563 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SYPL1Q16563 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYPL1Q16563 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.85■□□□□ 0.61
SYPL1Q16563 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYPL1Q16563 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYPL1Q16563 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYPL1Q16563 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.84■□□□□ 0.61
SYPL1Q16563 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYPL1Q16563 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYPL1Q16563 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.84■□□□□ 0.61
SYPL1Q16563 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYPL1Q16563 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYPL1Q16563 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.84■□□□□ 0.61
SYPL1Q16563 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.84■□□□□ 0.61
SYPL1Q16563 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.84■□□□□ 0.61
SYPL1Q16563 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SYPL1Q16563 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.84■□□□□ 0.61
SYPL1Q16563 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYPL1Q16563 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.84■□□□□ 0.61
SYPL1Q16563 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.84■□□□□ 0.61
SYPL1Q16563 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYPL1Q16563 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYPL1Q16563 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYPL1Q16563 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYPL1Q16563 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYPL1Q16563 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYPL1Q16563 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYPL1Q16563 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.84■□□□□ 0.61
SYPL1Q16563 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.83■□□□□ 0.61
SYPL1Q16563 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SYPL1Q16563 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYPL1Q16563 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SYPL1Q16563 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.83■□□□□ 0.6
SYPL1Q16563 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.83■□□□□ 0.6
SYPL1Q16563 AC026271.2-201ENST00000428091 497 ntBASIC18.83■□□□□ 0.6
SYPL1Q16563 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.83■□□□□ 0.6
SYPL1Q16563 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.83■□□□□ 0.6
SYPL1Q16563 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.83■□□□□ 0.6
SYPL1Q16563 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.83■□□□□ 0.6
SYPL1Q16563 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SYPL1Q16563 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.83■□□□□ 0.6
SYPL1Q16563 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SYPL1Q16563 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYPL1Q16563 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYPL1Q16563 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SYPL1Q16563 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYPL1Q16563 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SYPL1Q16563 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.82■□□□□ 0.6
SYPL1Q16563 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.82■□□□□ 0.6
SYPL1Q16563 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.82■□□□□ 0.6
SYPL1Q16563 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.82■□□□□ 0.6
SYPL1Q16563 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SYPL1Q16563 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.82■□□□□ 0.6
SYPL1Q16563 KRT18P11-201ENST00000435214 1283 ntBASIC18.82■□□□□ 0.6
SYPL1Q16563 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.82■□□□□ 0.6
SYPL1Q16563 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 AC016405.3-201ENST00000607710 860 ntBASIC18.82■□□□□ 0.6
SYPL1Q16563 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.82■□□□□ 0.6
SYPL1Q16563 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SYPL1Q16563 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYPL1Q16563 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.81■□□□□ 0.6
SYPL1Q16563 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SYPL1Q16563 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms