Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.86■□□□□ 0.77
CACNA1EQ15878 AC113347.1-201ENST00000413321 391 ntBASIC19.86■□□□□ 0.77
CACNA1EQ15878 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.86■□□□□ 0.77
CACNA1EQ15878 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.86■□□□□ 0.77
CACNA1EQ15878 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CACNA1EQ15878 AC073195.1-201ENST00000607241 877 ntBASIC19.86■□□□□ 0.77
CACNA1EQ15878 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1EQ15878 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1EQ15878 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CACNA1EQ15878 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CACNA1EQ15878 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1EQ15878 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1EQ15878 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.86■□□□□ 0.77
CACNA1EQ15878 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.86■□□□□ 0.77
CACNA1EQ15878 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.86■□□□□ 0.77
CACNA1EQ15878 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1EQ15878 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1EQ15878 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CACNA1EQ15878 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1EQ15878 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1EQ15878 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1EQ15878 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1EQ15878 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.85■□□□□ 0.77
CACNA1EQ15878 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.85■□□□□ 0.77
CACNA1EQ15878 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1EQ15878 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CACNA1EQ15878 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.85■□□□□ 0.77
CACNA1EQ15878 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1EQ15878 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CACNA1EQ15878 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1EQ15878 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1EQ15878 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.85■□□□□ 0.77
CACNA1EQ15878 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.85■□□□□ 0.77
CACNA1EQ15878 REXO1L10P-201ENST00000615707 1290 ntBASIC19.85■□□□□ 0.77
CACNA1EQ15878 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1EQ15878 PTBP1P-201ENST00000554374 1601 ntBASIC19.84■□□□□ 0.77
CACNA1EQ15878 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CACNA1EQ15878 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1EQ15878 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1EQ15878 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1EQ15878 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1EQ15878 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CACNA1EQ15878 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1EQ15878 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA1EQ15878 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1EQ15878 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1EQ15878 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
CACNA1EQ15878 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA1EQ15878 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1EQ15878 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1EQ15878 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA1EQ15878 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1EQ15878 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA1EQ15878 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.84■□□□□ 0.77
CACNA1EQ15878 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1EQ15878 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.84■□□□□ 0.77
CACNA1EQ15878 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CACNA1EQ15878 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.83■□□□□ 0.76
CACNA1EQ15878 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.83■□□□□ 0.76
CACNA1EQ15878 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1EQ15878 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1EQ15878 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1EQ15878 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.83■□□□□ 0.76
CACNA1EQ15878 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1EQ15878 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1EQ15878 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1EQ15878 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1EQ15878 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CACNA1EQ15878 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.82■□□□□ 0.76
CACNA1EQ15878 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.82■□□□□ 0.76
CACNA1EQ15878 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.82■□□□□ 0.76
CACNA1EQ15878 NTF6B-201ENST00000591913 560 ntBASIC19.82■□□□□ 0.76
CACNA1EQ15878 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.82■□□□□ 0.76
CACNA1EQ15878 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1EQ15878 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1EQ15878 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1EQ15878 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1EQ15878 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1EQ15878 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.82■□□□□ 0.76
CACNA1EQ15878 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1EQ15878 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1EQ15878 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.82■□□□□ 0.76
CACNA1EQ15878 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1EQ15878 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1EQ15878 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CACNA1EQ15878 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1EQ15878 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1EQ15878 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1EQ15878 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 AC116562.2-201ENST00000507042 360 ntBASIC19.81■□□□□ 0.76
CACNA1EQ15878 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 AL031963.3-201ENST00000606441 850 ntBASIC19.81■□□□□ 0.76
CACNA1EQ15878 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 AC011484.1-201ENST00000377652 1995 ntBASIC19.81■□□□□ 0.76
CACNA1EQ15878 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.81■□□□□ 0.76
CACNA1EQ15878 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms