Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAPQ12770 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCAPQ12770 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.97■□□□□ 0.95
SCAPQ12770 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAPQ12770 KRT18P29-201ENST00000397031 1267 ntBASIC20.97■□□□□ 0.95
SCAPQ12770 LSM12P1-201ENST00000411836 588 ntBASIC20.97■□□□□ 0.95
SCAPQ12770 POU5F1P3-201ENST00000428824 1078 ntBASIC20.97■□□□□ 0.95
SCAPQ12770 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.97■□□□□ 0.95
SCAPQ12770 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.97■□□□□ 0.95
SCAPQ12770 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAPQ12770 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAPQ12770 AC092667.1-201ENST00000434301 2586 ntBASIC20.96■□□□□ 0.95
SCAPQ12770 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCAPQ12770 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCAPQ12770 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCAPQ12770 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.96■□□□□ 0.95
SCAPQ12770 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCAPQ12770 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
SCAPQ12770 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SCAPQ12770 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.96■□□□□ 0.95
SCAPQ12770 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
SCAPQ12770 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SCAPQ12770 ITM2C-210ENST00000620962 501 ntBASIC20.96■□□□□ 0.95
SCAPQ12770 AC133041.1-202ENST00000642053 222 ntBASIC20.96■□□□□ 0.95
SCAPQ12770 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCAPQ12770 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCAPQ12770 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCAPQ12770 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCAPQ12770 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SCAPQ12770 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCAPQ12770 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SCAPQ12770 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SCAPQ12770 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SCAPQ12770 C2orf69P4-201ENST00000565394 541 ntBASIC20.95■□□□□ 0.94
SCAPQ12770 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SCAPQ12770 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.95■□□□□ 0.94
SCAPQ12770 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.95■□□□□ 0.94
SCAPQ12770 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCAPQ12770 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCAPQ12770 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCAPQ12770 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCAPQ12770 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCAPQ12770 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.94■□□□□ 0.94
SCAPQ12770 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
SCAPQ12770 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.94■□□□□ 0.94
SCAPQ12770 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.94■□□□□ 0.94
SCAPQ12770 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.94■□□□□ 0.94
SCAPQ12770 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.94■□□□□ 0.94
SCAPQ12770 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCAPQ12770 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SCAPQ12770 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.94■□□□□ 0.94
SCAPQ12770 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SCAPQ12770 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.94■□□□□ 0.94
SCAPQ12770 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCAPQ12770 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCAPQ12770 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCAPQ12770 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCAPQ12770 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCAPQ12770 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.93■□□□□ 0.94
SCAPQ12770 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCAPQ12770 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCAPQ12770 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SCAPQ12770 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SCAPQ12770 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCAPQ12770 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCAPQ12770 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.93■□□□□ 0.94
SCAPQ12770 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCAPQ12770 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.93■□□□□ 0.94
SCAPQ12770 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SCAPQ12770 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.93■□□□□ 0.94
SCAPQ12770 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.93■□□□□ 0.94
SCAPQ12770 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCAPQ12770 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCAPQ12770 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.93■□□□□ 0.94
SCAPQ12770 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCAPQ12770 AL512408.1-201ENST00000569378 2000 ntBASIC20.93■□□□□ 0.94
SCAPQ12770 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.93■□□□□ 0.94
SCAPQ12770 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCAPQ12770 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCAPQ12770 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCAPQ12770 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCAPQ12770 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.92■□□□□ 0.94
SCAPQ12770 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.92■□□□□ 0.94
SCAPQ12770 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.92■□□□□ 0.94
SCAPQ12770 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCAPQ12770 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCAPQ12770 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCAPQ12770 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCAPQ12770 AC073210.2-201ENST00000430369 194 ntBASIC20.92■□□□□ 0.94
SCAPQ12770 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.92■□□□□ 0.94
SCAPQ12770 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.92■□□□□ 0.94
SCAPQ12770 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.92■□□□□ 0.94
SCAPQ12770 MIR4758-201ENST00000577688 71 ntBASIC20.92■□□□□ 0.94
SCAPQ12770 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCAPQ12770 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCAPQ12770 PTBP1P-201ENST00000554374 1601 ntBASIC20.92■□□□□ 0.94
SCAPQ12770 DPP3P2-201ENST00000416030 1696 ntBASIC20.92■□□□□ 0.94
SCAPQ12770 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.92■□□□□ 0.94
SCAPQ12770 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.92■□□□□ 0.94
SCAPQ12770 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms