Protein–RNA interactions for Protein: Q03308

VPS16, Vacuolar protein sorting-associated protein 16, yeastyeast

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS16Q03308 ESL2YKR096W 3588 nt2.94□□□□□ -1.94
VPS16Q03308 YDL211CYDL211C 1119 nt2.93□□□□□ -1.94
VPS16Q03308 tC(GCA)BtC(GCA)B 72 nt2.93□□□□□ -1.94
VPS16Q03308 tC(GCA)GtC(GCA)G 72 nt2.93□□□□□ -1.94
VPS16Q03308 tC(GCA)P1tC(GCA)P1 72 nt2.93□□□□□ -1.94
VPS16Q03308 tC(GCA)P2tC(GCA)P2 72 nt2.93□□□□□ -1.94
VPS16Q03308 RPL38YLR325C 237 nt2.93□□□□□ -1.94
VPS16Q03308 YPR203WYPR203W 309 nt2.93□□□□□ -1.94
VPS16Q03308 PRP8YHR165C 7242 nt2.92□□□□□ -1.94
VPS16Q03308 EFR3YMR212C 2349 nt2.92□□□□□ -1.94
VPS16Q03308 SLH1YGR271W 5904 nt2.92□□□□□ -1.94
VPS16Q03308 YER079C-AYER079C-A 339 nt2.92□□□□□ -1.94
VPS16Q03308 ALG13YGL047W 609 nt2.92□□□□□ -1.94
VPS16Q03308 YIL102CYIL102C 306 nt2.92□□□□□ -1.94
VPS16Q03308 YDL062WYDL062W 426 nt2.91□□□□□ -1.94
VPS16Q03308 tF(GAA)DtF(GAA)D 73 nt2.91□□□□□ -1.94
VPS16Q03308 tF(GAA)NtF(GAA)N 73 nt2.91□□□□□ -1.94
VPS16Q03308 BLI1YKL061W 342 nt2.91□□□□□ -1.94
VPS16Q03308 BPT1YLL015W 4680 nt2.91□□□□□ -1.94
VPS16Q03308 RPS29AYLR388W 171 nt2.91□□□□□ -1.94
VPS16Q03308 DAD3YBR233W-A 285 nt2.91□□□□□ -1.94
VPS16Q03308 YIL080WYIL080W 4722 nt2.9□□□□□ -1.94
VPS16Q03308 YHR086W-AYHR086W-A 162 nt2.9□□□□□ -1.95
VPS16Q03308 YIL174WYIL174W 228 nt2.9□□□□□ -1.95
VPS16Q03308 YJL222W-AYJL222W-A 228 nt2.9□□□□□ -1.95
VPS16Q03308 PCC1YKR095W-A 267 nt2.9□□□□□ -1.95
VPS16Q03308 APC9YLR102C 798 nt2.9□□□□□ -1.95
VPS16Q03308 FAR11YNL127W 2862 nt2.9□□□□□ -1.95
VPS16Q03308 YPL216WYPL216W 3309 nt2.9□□□□□ -1.95
VPS16Q03308 MGM1YOR211C 2646 nt2.89□□□□□ -1.95
VPS16Q03308 HDA3YPR179C 1968 nt2.89□□□□□ -1.95
VPS16Q03308 NUP100YKL068W 2880 nt2.89□□□□□ -1.95
VPS16Q03308 STB4YMR019W 2850 nt2.89□□□□□ -1.95
VPS16Q03308 Q0032Q0032 291 nt2.89□□□□□ -1.95
VPS16Q03308 ZRG8YER033C 3231 nt2.89□□□□□ -1.95
VPS16Q03308 KEL2YGR238C 2649 nt2.89□□□□□ -1.95
VPS16Q03308 YLR146W-AYLR146W-A 189 nt2.89□□□□□ -1.95
VPS16Q03308 YML007C-AYML007C-A 111 nt2.89□□□□□ -1.95
VPS16Q03308 TOP2YNL088W 4287 nt2.89□□□□□ -1.95
VPS16Q03308 TUS1YLR425W 3924 nt2.89□□□□□ -1.95
VPS16Q03308 JIP5YPR169W 1479 nt2.89□□□□□ -1.95
VPS16Q03308 VPS34YLR240W 2628 nt2.89□□□□□ -1.95
VPS16Q03308 TOM1YDR457W 9807 nt2.88□□□□□ -1.95
VPS16Q03308 BUB1YGR188C 3066 nt2.88□□□□□ -1.95
VPS16Q03308 GRR1YJR090C 3456 nt2.88□□□□□ -1.95
VPS16Q03308 YOR333CYOR333C 417 nt2.88□□□□□ -1.95
VPS16Q03308 RPL33AYPL143W 324 nt2.88□□□□□ -1.95
VPS16Q03308 NUT2YPR168W 474 nt2.88□□□□□ -1.95
VPS16Q03308 SET2YJL168C 2202 nt2.88□□□□□ -1.95
VPS16Q03308 COS111YBR203W 2775 nt2.87□□□□□ -1.95
VPS16Q03308 NPC2YDL046W 522 nt2.87□□□□□ -1.95
VPS16Q03308 YBL083CYBL083C 426 nt2.87□□□□□ -1.95
VPS16Q03308 MOT1YPL082C 5604 nt2.87□□□□□ -1.95
VPS16Q03308 SLM1YIL105C 2061 nt2.87□□□□□ -1.95
VPS16Q03308 RAD61YDR014W 1944 nt2.87□□□□□ -1.95
VPS16Q03308 SWR1YDR334W 4545 nt2.87□□□□□ -1.95
VPS16Q03308 RGC1YPR115W 3252 nt2.86□□□□□ -1.95
VPS16Q03308 CDC36YDL165W 576 nt2.86□□□□□ -1.95
VPS16Q03308 YEL020C-BYEL020C-B 198 nt2.86□□□□□ -1.95
VPS16Q03308 YIL032CYIL032C 357 nt2.86□□□□□ -1.95
VPS16Q03308 YAL059C-AYAL059C-A 423 nt2.86□□□□□ -1.95
VPS16Q03308 YMR046W-AYMR046W-A 129 nt2.86□□□□□ -1.95
VPS16Q03308 SWI6YLR182W 2412 nt2.85□□□□□ -1.95
VPS16Q03308 ARP7YPR034W 1434 nt2.85□□□□□ -1.95
VPS16Q03308 AXL1YPR122W 3627 nt2.85□□□□□ -1.95
VPS16Q03308 ECM29YHL030W 5607 nt2.85□□□□□ -1.95
VPS16Q03308 YDR286CYDR286C 345 nt2.85□□□□□ -1.95
VPS16Q03308 YHL042WYHL042W 453 nt2.85□□□□□ -1.95
VPS16Q03308 YNL114CYNL114C 372 nt2.85□□□□□ -1.95
VPS16Q03308 snR49snR49 165 nt2.85□□□□□ -1.95
VPS16Q03308 EDS1YBR033W 2760 nt2.85□□□□□ -1.95
VPS16Q03308 VTC3YPL019C 2508 nt2.84□□□□□ -1.95
VPS16Q03308 SRO77YBL106C 3033 nt2.84□□□□□ -1.95
VPS16Q03308 RPL42BYHR141C 321 nt2.84□□□□□ -1.95
VPS16Q03308 RPL42AYNL162W 321 nt2.84□□□□□ -1.95
VPS16Q03308 YOR008C-AYOR008C-A 225 nt2.84□□□□□ -1.95
VPS16Q03308 DBP10YDL031W 2988 nt2.84□□□□□ -1.96
VPS16Q03308 IRR1YIL026C 3453 nt2.84□□□□□ -1.96
VPS16Q03308 SAP1YER047C 2694 nt2.84□□□□□ -1.96
VPS16Q03308 ISW1YBR245C 3390 nt2.83□□□□□ -1.96
VPS16Q03308 YGL041CYGL041C 204 nt2.83□□□□□ -1.96
VPS16Q03308 YLR012CYLR012C 300 nt2.83□□□□□ -1.96
VPS16Q03308 UPS1YLR193C 528 nt2.83□□□□□ -1.96
VPS16Q03308 SMC6YLR383W 3345 nt2.83□□□□□ -1.96
VPS16Q03308 VMR1YHL035C 4779 nt2.83□□□□□ -1.96
VPS16Q03308 SEC7YDR170C 6030 nt2.83□□□□□ -1.96
VPS16Q03308 COG8YML071C 1824 nt2.82□□□□□ -1.96
VPS16Q03308 YFH1YDL120W 525 nt2.82□□□□□ -1.96
VPS16Q03308 YDR426CYDR426C 378 nt2.82□□□□□ -1.96
VPS16Q03308 SDH2YLL041C 801 nt2.82□□□□□ -1.96
VPS16Q03308 SMA2YML066C 1110 nt2.82□□□□□ -1.96
VPS16Q03308 MET18YIL128W 3099 nt2.81□□□□□ -1.96
VPS16Q03308 YDR209CYDR209C 414 nt2.81□□□□□ -1.96
VPS16Q03308 YDR406W-AYDR406W-A 246 nt2.81□□□□□ -1.96
VPS16Q03308 HYP2YEL034W 474 nt2.81□□□□□ -1.96
VPS16Q03308 ABF2YMR072W 552 nt2.81□□□□□ -1.96
VPS16Q03308 snR43snR43 209 nt2.81□□□□□ -1.96
VPS16Q03308 NOP53YPL146C 1368 nt2.81□□□□□ -1.96
VPS16Q03308 MCD1YDL003W 1701 nt2.81□□□□□ -1.96
VPS16Q03308 PXA2YKL188C 2562 nt2.81□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms