Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AL020996.1-203ENST00000536896 2307 ntBASIC19.91■□□□□ 0.78
CDKL1Q00532 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL1Q00532 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.91■□□□□ 0.78
CDKL1Q00532 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDKL1Q00532 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CDKL1Q00532 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDKL1Q00532 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKL1Q00532 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL1Q00532 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL1Q00532 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKL1Q00532 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKL1Q00532 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL1Q00532 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.9■□□□□ 0.78
CDKL1Q00532 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL1Q00532 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL1Q00532 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CDKL1Q00532 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.9■□□□□ 0.78
CDKL1Q00532 AC092720.2-201ENST00000602388 1665 ntBASIC19.9■□□□□ 0.78
CDKL1Q00532 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL1Q00532 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
CDKL1Q00532 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.9■□□□□ 0.78
CDKL1Q00532 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKL1Q00532 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL1Q00532 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL1Q00532 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL1Q00532 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.9■□□□□ 0.78
CDKL1Q00532 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKL1Q00532 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDKL1Q00532 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.89■□□□□ 0.78
CDKL1Q00532 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.78
CDKL1Q00532 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL1Q00532 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL1Q00532 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL1Q00532 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL1Q00532 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL1Q00532 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL1Q00532 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL1Q00532 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL1Q00532 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDKL1Q00532 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDKL1Q00532 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL1Q00532 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.89■□□□□ 0.77
CDKL1Q00532 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.89■□□□□ 0.77
CDKL1Q00532 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDKL1Q00532 KRT8P36-201ENST00000489121 1440 ntBASIC19.89■□□□□ 0.77
CDKL1Q00532 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL1Q00532 DUX4L16-201ENST00000555130 1264 ntBASIC19.89■□□□□ 0.77
CDKL1Q00532 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.89■□□□□ 0.77
CDKL1Q00532 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDKL1Q00532 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKL1Q00532 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CDKL1Q00532 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CDKL1Q00532 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.88■□□□□ 0.77
CDKL1Q00532 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.88■□□□□ 0.77
CDKL1Q00532 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CDKL1Q00532 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL1Q00532 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL1Q00532 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL1Q00532 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.88■□□□□ 0.77
CDKL1Q00532 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.88■□□□□ 0.77
CDKL1Q00532 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.88■□□□□ 0.77
CDKL1Q00532 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL1Q00532 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDKL1Q00532 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL1Q00532 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL1Q00532 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CDKL1Q00532 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.88■□□□□ 0.77
CDKL1Q00532 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.88■□□□□ 0.77
CDKL1Q00532 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKL1Q00532 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDKL1Q00532 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CDKL1Q00532 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.88■□□□□ 0.77
CDKL1Q00532 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.87■□□□□ 0.77
CDKL1Q00532 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKL1Q00532 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CDKL1Q00532 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL1Q00532 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL1Q00532 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL1Q00532 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL1Q00532 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL1Q00532 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL1Q00532 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKL1Q00532 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL1Q00532 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL1Q00532 PGM5P4-201ENST00000421970 445 ntBASIC19.87■□□□□ 0.77
CDKL1Q00532 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDKL1Q00532 CNN2P6-201ENST00000439038 900 ntBASIC19.87■□□□□ 0.77
CDKL1Q00532 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.87■□□□□ 0.77
CDKL1Q00532 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.87■□□□□ 0.77
CDKL1Q00532 AC011767.1-201ENST00000617410 1153 ntBASIC19.87■□□□□ 0.77
CDKL1Q00532 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.87■□□□□ 0.77
CDKL1Q00532 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL1Q00532 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL1Q00532 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL1Q00532 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL1Q00532 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL1Q00532 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL1Q00532 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CDKL1Q00532 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.86■□□□□ 0.77
CDKL1Q00532 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms