Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.3■□□□□ 0.2
CX3CL1P78423 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CX3CL1P78423 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CX3CL1P78423 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CL1P78423 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CL1P78423 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CL1P78423 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CX3CL1P78423 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CL1P78423 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.29■□□□□ 0.2
CX3CL1P78423 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CL1P78423 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CL1P78423 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CX3CL1P78423 AC007322.1-201ENST00000426983 750 ntBASIC16.29■□□□□ 0.2
CX3CL1P78423 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.29■□□□□ 0.2
CX3CL1P78423 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.29■□□□□ 0.2
CX3CL1P78423 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CX3CL1P78423 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.29■□□□□ 0.2
CX3CL1P78423 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CL1P78423 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CL1P78423 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CL1P78423 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
CX3CL1P78423 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CX3CL1P78423 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CL1P78423 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.28■□□□□ 0.2
CX3CL1P78423 AC027702.1-201ENST00000563810 1770 ntBASIC16.28■□□□□ 0.2
CX3CL1P78423 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.28■□□□□ 0.2
CX3CL1P78423 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CL1P78423 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CL1P78423 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.28■□□□□ 0.2
CX3CL1P78423 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CX3CL1P78423 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.28■□□□□ 0.2
CX3CL1P78423 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CL1P78423 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.28■□□□□ 0.2
CX3CL1P78423 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CX3CL1P78423 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.28■□□□□ 0.2
CX3CL1P78423 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CL1P78423 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.28■□□□□ 0.2
CX3CL1P78423 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.28■□□□□ 0.2
CX3CL1P78423 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.28■□□□□ 0.2
CX3CL1P78423 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.28■□□□□ 0.2
CX3CL1P78423 FAM21FP-204ENST00000608637 956 ntBASIC16.28■□□□□ 0.2
CX3CL1P78423 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.28■□□□□ 0.2
CX3CL1P78423 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CL1P78423 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.28■□□□□ 0.2
CX3CL1P78423 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.28■□□□□ 0.2
CX3CL1P78423 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CL1P78423 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CL1P78423 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.28■□□□□ 0.2
CX3CL1P78423 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CL1P78423 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CL1P78423 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CX3CL1P78423 AC068338.2-201ENST00000563278 1430 ntBASIC16.28■□□□□ 0.2
CX3CL1P78423 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CL1P78423 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CX3CL1P78423 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.27■□□□□ 0.2
CX3CL1P78423 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CL1P78423 FP700111.2-201ENST00000619190 1892 ntBASIC16.27■□□□□ 0.2
CX3CL1P78423 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CL1P78423 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CL1P78423 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.27■□□□□ 0.2
CX3CL1P78423 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CL1P78423 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CL1P78423 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CL1P78423 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CX3CL1P78423 AC007225.1-201ENST00000566331 1836 ntBASIC16.27■□□□□ 0.2
CX3CL1P78423 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CL1P78423 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.27■□□□□ 0.2
CX3CL1P78423 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.27■□□□□ 0.2
CX3CL1P78423 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CL1P78423 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.27■□□□□ 0.2
CX3CL1P78423 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.27■□□□□ 0.2
CX3CL1P78423 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.27■□□□□ 0.2
CX3CL1P78423 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.27■□□□□ 0.2
CX3CL1P78423 AC092666.2-201ENST00000613287 246 ntBASIC16.27■□□□□ 0.2
CX3CL1P78423 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CX3CL1P78423 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CX3CL1P78423 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CX3CL1P78423 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.27■□□□□ 0.2
CX3CL1P78423 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.27■□□□□ 0.2
CX3CL1P78423 FEM1AP1-201ENST00000431297 1995 ntBASIC16.27■□□□□ 0.19
CX3CL1P78423 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
CX3CL1P78423 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.27■□□□□ 0.19
CX3CL1P78423 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CX3CL1P78423 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CX3CL1P78423 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.27■□□□□ 0.19
CX3CL1P78423 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CX3CL1P78423 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CX3CL1P78423 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CX3CL1P78423 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.26■□□□□ 0.19
CX3CL1P78423 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CX3CL1P78423 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CL1P78423 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CX3CL1P78423 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CX3CL1P78423 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CL1P78423 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CX3CL1P78423 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CX3CL1P78423 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.26■□□□□ 0.19
CX3CL1P78423 AC016405.3-201ENST00000607710 860 ntBASIC16.26■□□□□ 0.19
CX3CL1P78423 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.26■□□□□ 0.19
CX3CL1P78423 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms