Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
LSM6P62312 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM6P62312 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSM6P62312 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSM6P62312 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.82■□□□□ 0.44
LSM6P62312 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.82■□□□□ 0.44
LSM6P62312 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSM6P62312 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LSM6P62312 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM6P62312 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LSM6P62312 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LSM6P62312 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LSM6P62312 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM6P62312 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.81■□□□□ 0.44
LSM6P62312 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM6P62312 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LSM6P62312 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM6P62312 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM6P62312 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM6P62312 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.81■□□□□ 0.44
LSM6P62312 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.81■□□□□ 0.44
LSM6P62312 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM6P62312 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.81■□□□□ 0.44
LSM6P62312 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.81■□□□□ 0.44
LSM6P62312 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.81■□□□□ 0.44
LSM6P62312 AC008694.1-202ENST00000636953 945 ntBASIC17.81■□□□□ 0.44
LSM6P62312 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM6P62312 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.81■□□□□ 0.44
LSM6P62312 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LSM6P62312 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.81■□□□□ 0.44
LSM6P62312 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM6P62312 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM6P62312 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM6P62312 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM6P62312 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.8■□□□□ 0.44
LSM6P62312 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.8■□□□□ 0.44
LSM6P62312 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM6P62312 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LSM6P62312 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LSM6P62312 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM6P62312 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM6P62312 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM6P62312 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LSM6P62312 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.8■□□□□ 0.44
LSM6P62312 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LSM6P62312 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LSM6P62312 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSM6P62312 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LSM6P62312 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.79■□□□□ 0.44
LSM6P62312 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LSM6P62312 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSM6P62312 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSM6P62312 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSM6P62312 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSM6P62312 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSM6P62312 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.79■□□□□ 0.44
LSM6P62312 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.79■□□□□ 0.44
LSM6P62312 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSM6P62312 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSM6P62312 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.79■□□□□ 0.44
LSM6P62312 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSM6P62312 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.79■□□□□ 0.44
LSM6P62312 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSM6P62312 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSM6P62312 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LSM6P62312 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LSM6P62312 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM6P62312 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM6P62312 AC099778.1-201ENST00000568593 1911 ntBASIC17.78■□□□□ 0.44
LSM6P62312 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.78■□□□□ 0.44
LSM6P62312 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM6P62312 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.78■□□□□ 0.44
LSM6P62312 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM6P62312 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.78■□□□□ 0.44
LSM6P62312 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.78■□□□□ 0.44
LSM6P62312 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
LSM6P62312 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM6P62312 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM6P62312 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LSM6P62312 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.78■□□□□ 0.44
LSM6P62312 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.78■□□□□ 0.44
LSM6P62312 CYP2T1P-201ENST00000432607 1285 ntBASIC17.78■□□□□ 0.44
LSM6P62312 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.78■□□□□ 0.44
LSM6P62312 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LSM6P62312 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.78■□□□□ 0.44
LSM6P62312 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.78■□□□□ 0.44
LSM6P62312 OR10C1-204ENST00000622521 1039 ntBASIC17.78■□□□□ 0.44
LSM6P62312 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LSM6P62312 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.78■□□□□ 0.44
LSM6P62312 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.78■□□□□ 0.44
LSM6P62312 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LSM6P62312 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM6P62312 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.78■□□□□ 0.44
LSM6P62312 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM6P62312 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LSM6P62312 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.77■□□□□ 0.44
LSM6P62312 DPP3P2-201ENST00000416030 1696 ntBASIC17.77■□□□□ 0.44
LSM6P62312 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM6P62312 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.77■□□□□ 0.44
LSM6P62312 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms