Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SRP54P61011 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SRP54P61011 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP54P61011 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP54P61011 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP54P61011 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SRP54P61011 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.99■□□□□ 0.79
SRP54P61011 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SRP54P61011 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP54P61011 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP54P61011 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SRP54P61011 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP54P61011 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SRP54P61011 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.99■□□□□ 0.79
SRP54P61011 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.99■□□□□ 0.79
SRP54P61011 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP54P61011 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP54P61011 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP54P61011 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
SRP54P61011 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP54P61011 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.99■□□□□ 0.79
SRP54P61011 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP54P61011 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP54P61011 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SRP54P61011 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.99■□□□□ 0.79
SRP54P61011 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.98■□□□□ 0.79
SRP54P61011 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SRP54P61011 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRP54P61011 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SRP54P61011 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.98■□□□□ 0.79
SRP54P61011 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SRP54P61011 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRP54P61011 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.98■□□□□ 0.79
SRP54P61011 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.98■□□□□ 0.79
SRP54P61011 AP006294.2-201ENST00000641667 209 ntBASIC19.98■□□□□ 0.79
SRP54P61011 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SRP54P61011 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRP54P61011 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SRP54P61011 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SRP54P61011 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRP54P61011 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRP54P61011 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.98■□□□□ 0.79
SRP54P61011 FEM1AP4-201ENST00000443167 1987 ntBASIC19.97■□□□□ 0.79
SRP54P61011 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRP54P61011 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SRP54P61011 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
SRP54P61011 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.97■□□□□ 0.79
SRP54P61011 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SRP54P61011 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRP54P61011 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRP54P61011 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.97■□□□□ 0.79
SRP54P61011 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.97■□□□□ 0.79
SRP54P61011 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.97■□□□□ 0.79
SRP54P61011 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.97■□□□□ 0.79
SRP54P61011 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SRP54P61011 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.97■□□□□ 0.79
SRP54P61011 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.97■□□□□ 0.79
SRP54P61011 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SRP54P61011 MIR2861-201ENST00000636310 90 ntBASIC19.97■□□□□ 0.79
SRP54P61011 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRP54P61011 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRP54P61011 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRP54P61011 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SRP54P61011 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.97■□□□□ 0.79
SRP54P61011 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.97■□□□□ 0.79
SRP54P61011 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SRP54P61011 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRP54P61011 SLC25A24-204ENST00000569674 2357 ntBASIC19.97■□□□□ 0.79
SRP54P61011 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRP54P61011 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.96■□□□□ 0.79
SRP54P61011 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRP54P61011 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRP54P61011 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRP54P61011 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRP54P61011 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRP54P61011 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SRP54P61011 POM121L13P-201ENST00000422362 380 ntBASIC19.96■□□□□ 0.79
SRP54P61011 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.96■□□□□ 0.79
SRP54P61011 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.96■□□□□ 0.79
SRP54P61011 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SRP54P61011 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.96■□□□□ 0.79
SRP54P61011 AC005829.2-201ENST00000571422 1056 ntBASIC19.96■□□□□ 0.79
SRP54P61011 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.96■□□□□ 0.79
SRP54P61011 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.96■□□□□ 0.79
SRP54P61011 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SRP54P61011 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRP54P61011 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRP54P61011 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRP54P61011 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRP54P61011 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.95■□□□□ 0.78
SRP54P61011 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SRP54P61011 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.95■□□□□ 0.78
SRP54P61011 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms