Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.5■□□□□ 0.55
CDC42P60953 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC42P60953 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.49■□□□□ 0.55
CDC42P60953 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.49■□□□□ 0.55
CDC42P60953 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDC42P60953 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC42P60953 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDC42P60953 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC42P60953 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CDC42P60953 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.49■□□□□ 0.55
CDC42P60953 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.49■□□□□ 0.55
CDC42P60953 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDC42P60953 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDC42P60953 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDC42P60953 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.49■□□□□ 0.55
CDC42P60953 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC42P60953 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC42P60953 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC42P60953 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC42P60953 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CDC42P60953 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.48■□□□□ 0.55
CDC42P60953 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDC42P60953 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CDC42P60953 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.48■□□□□ 0.55
CDC42P60953 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.48■□□□□ 0.55
CDC42P60953 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.48■□□□□ 0.55
CDC42P60953 MIR4767-201ENST00000582827 78 ntBASIC18.48■□□□□ 0.55
CDC42P60953 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.48■□□□□ 0.55
CDC42P60953 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDC42P60953 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.48■□□□□ 0.55
CDC42P60953 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC42P60953 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDC42P60953 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDC42P60953 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC42P60953 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC42P60953 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDC42P60953 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC42P60953 AL356441.2-201ENST00000443009 864 ntBASIC18.47■□□□□ 0.55
CDC42P60953 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC42P60953 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.47■□□□□ 0.55
CDC42P60953 AC008175.2-201ENST00000612840 297 ntBASIC18.47■□□□□ 0.55
CDC42P60953 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC42P60953 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC42P60953 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC42P60953 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDC42P60953 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CDC42P60953 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC42P60953 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.47■□□□□ 0.55
CDC42P60953 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDC42P60953 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC42P60953 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.46■□□□□ 0.55
CDC42P60953 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC42P60953 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDC42P60953 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CDC42P60953 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CDC42P60953 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC42P60953 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDC42P60953 MIR2861-201ENST00000636310 90 ntBASIC18.46■□□□□ 0.55
CDC42P60953 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC42P60953 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC42P60953 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDC42P60953 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC42P60953 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDC42P60953 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDC42P60953 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC42P60953 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDC42P60953 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC42P60953 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDC42P60953 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDC42P60953 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.46■□□□□ 0.54
CDC42P60953 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDC42P60953 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CDC42P60953 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.45■□□□□ 0.54
CDC42P60953 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDC42P60953 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDC42P60953 AP000974.1-201ENST00000623909 2387 ntBASIC18.45■□□□□ 0.54
CDC42P60953 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDC42P60953 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDC42P60953 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDC42P60953 POU5F1P4-201ENST00000413175 1085 ntBASIC18.45■□□□□ 0.54
CDC42P60953 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.45■□□□□ 0.54
CDC42P60953 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDC42P60953 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDC42P60953 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
CDC42P60953 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms