Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM11AP58511 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM11AP58511 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM11AP58511 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.65■□□□□ 0.58
SMIM11AP58511 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM11AP58511 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM11AP58511 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.65■□□□□ 0.58
SMIM11AP58511 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.65■□□□□ 0.58
SMIM11AP58511 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM11AP58511 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM11AP58511 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMIM11AP58511 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SMIM11AP58511 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM11AP58511 SMG8-203ENST00000578922 2178 ntBASIC18.65■□□□□ 0.58
SMIM11AP58511 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SMIM11AP58511 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.64■□□□□ 0.58
SMIM11AP58511 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM11AP58511 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM11AP58511 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM11AP58511 AC138932.1-201ENST00000534164 6830 ntBASIC18.64■□□□□ 0.57
SMIM11AP58511 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM11AP58511 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.64■□□□□ 0.57
SMIM11AP58511 IRS3P-201ENST00000223076 1006 ntBASIC18.64■□□□□ 0.57
SMIM11AP58511 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM11AP58511 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SMIM11AP58511 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SMIM11AP58511 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM11AP58511 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMIM11AP58511 SUDS3P1-201ENST00000505831 966 ntBASIC18.64■□□□□ 0.57
SMIM11AP58511 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SMIM11AP58511 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM11AP58511 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM11AP58511 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.64■□□□□ 0.57
SMIM11AP58511 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMIM11AP58511 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SMIM11AP58511 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM11AP58511 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM11AP58511 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM11AP58511 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM11AP58511 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM11AP58511 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM11AP58511 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.63■□□□□ 0.57
SMIM11AP58511 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.63■□□□□ 0.57
SMIM11AP58511 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.63■□□□□ 0.57
SMIM11AP58511 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM11AP58511 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.63■□□□□ 0.57
SMIM11AP58511 KRT18P20-201ENST00000548986 1279 ntBASIC18.63■□□□□ 0.57
SMIM11AP58511 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.63■□□□□ 0.57
SMIM11AP58511 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.63■□□□□ 0.57
SMIM11AP58511 MIR6084-201ENST00000622012 110 ntBASIC18.63■□□□□ 0.57
SMIM11AP58511 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SMIM11AP58511 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM11AP58511 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.63■□□□□ 0.57
SMIM11AP58511 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM11AP58511 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM11AP58511 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.62■□□□□ 0.57
SMIM11AP58511 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM11AP58511 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM11AP58511 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM11AP58511 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM11AP58511 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM11AP58511 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SMIM11AP58511 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.62■□□□□ 0.57
SMIM11AP58511 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.62■□□□□ 0.57
SMIM11AP58511 CCDC92B-201ENST00000575506 885 ntBASIC18.62■□□□□ 0.57
SMIM11AP58511 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.62■□□□□ 0.57
SMIM11AP58511 KRT8P36-201ENST00000489121 1440 ntBASIC18.62■□□□□ 0.57
SMIM11AP58511 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM11AP58511 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM11AP58511 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM11AP58511 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM11AP58511 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.62■□□□□ 0.57
SMIM11AP58511 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM11AP58511 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM11AP58511 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SMIM11AP58511 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.62■□□□□ 0.57
SMIM11AP58511 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM11AP58511 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM11AP58511 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
SMIM11AP58511 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM11AP58511 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM11AP58511 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM11AP58511 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM11AP58511 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SMIM11AP58511 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.61■□□□□ 0.57
SMIM11AP58511 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.61■□□□□ 0.57
SMIM11AP58511 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.61■□□□□ 0.57
SMIM11AP58511 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM11AP58511 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM11AP58511 AP001160.3-201ENST00000601484 763 ntBASIC18.61■□□□□ 0.57
SMIM11AP58511 FAM21FP-204ENST00000608637 956 ntBASIC18.61■□□□□ 0.57
SMIM11AP58511 AC243732.1-201ENST00000612648 864 ntBASIC18.61■□□□□ 0.57
SMIM11AP58511 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM11AP58511 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM11AP58511 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM11AP58511 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.61■□□□□ 0.57
SMIM11AP58511 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.6■□□□□ 0.57
SMIM11AP58511 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.6■□□□□ 0.57
SMIM11AP58511 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
SMIM11AP58511 TMEM179-206ENST00000616017 1645 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms