Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VSX2P58304 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VSX2P58304 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
VSX2P58304 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VSX2P58304 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.39■□□□□ 0.69
VSX2P58304 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.39■□□□□ 0.69
VSX2P58304 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
VSX2P58304 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.39■□□□□ 0.69
VSX2P58304 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VSX2P58304 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.39■□□□□ 0.69
VSX2P58304 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
VSX2P58304 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VSX2P58304 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
VSX2P58304 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
VSX2P58304 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VSX2P58304 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VSX2P58304 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.38■□□□□ 0.69
VSX2P58304 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VSX2P58304 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VSX2P58304 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VSX2P58304 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VSX2P58304 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.38■□□□□ 0.69
VSX2P58304 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.38■□□□□ 0.69
VSX2P58304 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VSX2P58304 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.38■□□□□ 0.69
VSX2P58304 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VSX2P58304 AL121603.2-201ENST00000557373 2117 ntBASIC19.38■□□□□ 0.69
VSX2P58304 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.38■□□□□ 0.69
VSX2P58304 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.38■□□□□ 0.69
VSX2P58304 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.38■□□□□ 0.69
VSX2P58304 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSX2P58304 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VSX2P58304 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSX2P58304 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSX2P58304 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSX2P58304 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.37■□□□□ 0.69
VSX2P58304 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSX2P58304 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSX2P58304 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VSX2P58304 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.37■□□□□ 0.69
VSX2P58304 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSX2P58304 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSX2P58304 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VSX2P58304 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.37■□□□□ 0.69
VSX2P58304 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.37■□□□□ 0.69
VSX2P58304 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSX2P58304 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSX2P58304 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSX2P58304 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VSX2P58304 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
VSX2P58304 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.37■□□□□ 0.69
VSX2P58304 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VSX2P58304 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VSX2P58304 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VSX2P58304 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VSX2P58304 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
VSX2P58304 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VSX2P58304 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.36■□□□□ 0.69
VSX2P58304 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VSX2P58304 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VSX2P58304 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.36■□□□□ 0.69
VSX2P58304 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VSX2P58304 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.36■□□□□ 0.69
VSX2P58304 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.36■□□□□ 0.69
VSX2P58304 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.36■□□□□ 0.69
VSX2P58304 MIR4651-201ENST00000582622 73 ntBASIC19.36■□□□□ 0.69
VSX2P58304 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.36■□□□□ 0.69
VSX2P58304 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.36■□□□□ 0.69
VSX2P58304 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.36■□□□□ 0.69
VSX2P58304 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
VSX2P58304 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VSX2P58304 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VSX2P58304 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.36■□□□□ 0.69
VSX2P58304 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VSX2P58304 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VSX2P58304 AC007225.1-201ENST00000566331 1836 ntBASIC19.35■□□□□ 0.69
VSX2P58304 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.35■□□□□ 0.69
VSX2P58304 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.35■□□□□ 0.69
VSX2P58304 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.35■□□□□ 0.69
VSX2P58304 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VSX2P58304 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VSX2P58304 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VSX2P58304 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VSX2P58304 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
VSX2P58304 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VSX2P58304 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VSX2P58304 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VSX2P58304 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.35■□□□□ 0.69
VSX2P58304 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VSX2P58304 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.35■□□□□ 0.69
VSX2P58304 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.35■□□□□ 0.69
VSX2P58304 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VSX2P58304 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.34■□□□□ 0.69
VSX2P58304 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VSX2P58304 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VSX2P58304 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VSX2P58304 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.34■□□□□ 0.69
VSX2P58304 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VSX2P58304 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VSX2P58304 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms