Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
RIPPLY3P57055 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
RIPPLY3P57055 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.79■□□□□ 0.28
RIPPLY3P57055 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.79■□□□□ 0.28
RIPPLY3P57055 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RIPPLY3P57055 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIPPLY3P57055 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIPPLY3P57055 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
RIPPLY3P57055 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.79■□□□□ 0.28
RIPPLY3P57055 KRT8P45-201ENST00000414328 1447 ntBASIC16.79■□□□□ 0.28
RIPPLY3P57055 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RIPPLY3P57055 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPPLY3P57055 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPPLY3P57055 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPPLY3P57055 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RIPPLY3P57055 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPPLY3P57055 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RIPPLY3P57055 FAM86EP-206ENST00000510506 987 ntBASIC16.78■□□□□ 0.28
RIPPLY3P57055 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 AC012313.10-201ENST00000623509 926 ntBASIC16.78■□□□□ 0.28
RIPPLY3P57055 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPPLY3P57055 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPPLY3P57055 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
RIPPLY3P57055 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RIPPLY3P57055 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPPLY3P57055 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPPLY3P57055 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIPPLY3P57055 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
RIPPLY3P57055 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RIPPLY3P57055 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RIPPLY3P57055 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RIPPLY3P57055 AC022898.2-201ENST00000616822 1312 ntBASIC16.77■□□□□ 0.28
RIPPLY3P57055 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPPLY3P57055 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPPLY3P57055 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.77■□□□□ 0.28
RIPPLY3P57055 RNF152P1-201ENST00000397754 604 ntBASIC16.77■□□□□ 0.28
RIPPLY3P57055 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.77■□□□□ 0.28
RIPPLY3P57055 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RIPPLY3P57055 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RIPPLY3P57055 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.77■□□□□ 0.28
RIPPLY3P57055 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.77■□□□□ 0.28
RIPPLY3P57055 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RIPPLY3P57055 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.77■□□□□ 0.27
RIPPLY3P57055 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.77■□□□□ 0.27
RIPPLY3P57055 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RIPPLY3P57055 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIPPLY3P57055 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.77■□□□□ 0.27
RIPPLY3P57055 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.77■□□□□ 0.27
RIPPLY3P57055 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.77■□□□□ 0.27
RIPPLY3P57055 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RIPPLY3P57055 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIPPLY3P57055 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPPLY3P57055 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPPLY3P57055 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIPPLY3P57055 KRT18P68-201ENST00000392293 1000 ntBASIC16.76■□□□□ 0.27
RIPPLY3P57055 FAM220CP-201ENST00000395253 831 ntBASIC16.76■□□□□ 0.27
RIPPLY3P57055 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPPLY3P57055 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPPLY3P57055 AC244107.1-201ENST00000442033 332 ntBASIC16.76■□□□□ 0.27
RIPPLY3P57055 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.76■□□□□ 0.27
RIPPLY3P57055 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.76■□□□□ 0.27
RIPPLY3P57055 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RIPPLY3P57055 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPPLY3P57055 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RIPPLY3P57055 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPPLY3P57055 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RIPPLY3P57055 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPPLY3P57055 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.75■□□□□ 0.27
RIPPLY3P57055 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPPLY3P57055 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RIPPLY3P57055 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPPLY3P57055 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPPLY3P57055 SLC6A10P-202ENST00000431994 2058 ntBASIC16.75■□□□□ 0.27
RIPPLY3P57055 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.75■□□□□ 0.27
RIPPLY3P57055 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPPLY3P57055 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPPLY3P57055 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.75■□□□□ 0.27
RIPPLY3P57055 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RIPPLY3P57055 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.75■□□□□ 0.27
RIPPLY3P57055 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.75■□□□□ 0.27
RIPPLY3P57055 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.75■□□□□ 0.27
RIPPLY3P57055 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.75■□□□□ 0.27
RIPPLY3P57055 AC004264.1-201ENST00000608354 794 ntBASIC16.75■□□□□ 0.27
RIPPLY3P57055 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.75■□□□□ 0.27
RIPPLY3P57055 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.75■□□□□ 0.27
RIPPLY3P57055 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RIPPLY3P57055 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms