Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
GTF2A1P52655 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF2A1P52655 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
GTF2A1P52655 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
GTF2A1P52655 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.86■□□□□ 0.77
GTF2A1P52655 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.86■□□□□ 0.77
GTF2A1P52655 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
GTF2A1P52655 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 AC141586.5-201ENST00000624546 2050 ntBASIC19.85■□□□□ 0.77
GTF2A1P52655 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 AC009053.2-201ENST00000563701 2365 ntBASIC19.85■□□□□ 0.77
GTF2A1P52655 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.85■□□□□ 0.77
GTF2A1P52655 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
GTF2A1P52655 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
GTF2A1P52655 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.85■□□□□ 0.77
GTF2A1P52655 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.85■□□□□ 0.77
GTF2A1P52655 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
GTF2A1P52655 AC125437.2-201ENST00000625180 2167 ntBASIC19.85■□□□□ 0.77
GTF2A1P52655 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.85■□□□□ 0.77
GTF2A1P52655 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
GTF2A1P52655 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.85■□□□□ 0.77
GTF2A1P52655 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF2A1P52655 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF2A1P52655 AC006128.1-201ENST00000624704 1661 ntBASIC19.84■□□□□ 0.77
GTF2A1P52655 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GTF2A1P52655 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF2A1P52655 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.84■□□□□ 0.77
GTF2A1P52655 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF2A1P52655 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
GTF2A1P52655 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF2A1P52655 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
GTF2A1P52655 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GTF2A1P52655 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.84■□□□□ 0.77
GTF2A1P52655 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF2A1P52655 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
GTF2A1P52655 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF2A1P52655 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.84■□□□□ 0.77
GTF2A1P52655 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GTF2A1P52655 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF2A1P52655 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GTF2A1P52655 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF2A1P52655 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
GTF2A1P52655 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF2A1P52655 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GTF2A1P52655 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GTF2A1P52655 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.83■□□□□ 0.77
GTF2A1P52655 RNF126P1-201ENST00000567452 1320 ntBASIC19.83■□□□□ 0.77
GTF2A1P52655 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF2A1P52655 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF2A1P52655 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF2A1P52655 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
GTF2A1P52655 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
GTF2A1P52655 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GTF2A1P52655 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.83■□□□□ 0.76
GTF2A1P52655 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GTF2A1P52655 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GTF2A1P52655 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
GTF2A1P52655 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.83■□□□□ 0.76
GTF2A1P52655 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GTF2A1P52655 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GTF2A1P52655 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A1P52655 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
GTF2A1P52655 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A1P52655 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
GTF2A1P52655 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A1P52655 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A1P52655 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A1P52655 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.82■□□□□ 0.76
GTF2A1P52655 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A1P52655 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
GTF2A1P52655 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A1P52655 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A1P52655 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A1P52655 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
GTF2A1P52655 AL162377.1-201ENST00000618844 1793 ntBASIC19.82■□□□□ 0.76
GTF2A1P52655 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A1P52655 HTR7P1-202ENST00000624664 4411 ntBASIC19.82■□□□□ 0.76
GTF2A1P52655 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A1P52655 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
GTF2A1P52655 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A1P52655 AL391005.1-201ENST00000623953 2435 ntBASIC19.82■□□□□ 0.76
GTF2A1P52655 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.82■□□□□ 0.76
GTF2A1P52655 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.82■□□□□ 0.76
GTF2A1P52655 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A1P52655 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms