Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF144AP50876 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF144AP50876 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF144AP50876 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF144AP50876 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF144AP50876 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.8■□□□□ 0.6
RNF144AP50876 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.8■□□□□ 0.6
RNF144AP50876 AC013268.1-206ENST00000638368 961 ntBASIC18.8■□□□□ 0.6
RNF144AP50876 AC112229.1-201ENST00000639295 961 ntBASIC18.8■□□□□ 0.6
RNF144AP50876 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RNF144AP50876 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF144AP50876 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF144AP50876 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF144AP50876 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF144AP50876 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF144AP50876 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF144AP50876 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
RNF144AP50876 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF144AP50876 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF144AP50876 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF144AP50876 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF144AP50876 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
RNF144AP50876 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RNF144AP50876 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF144AP50876 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RNF144AP50876 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF144AP50876 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF144AP50876 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
RNF144AP50876 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF144AP50876 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF144AP50876 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF144AP50876 CDV3P1-201ENST00000471403 739 ntBASIC18.79■□□□□ 0.6
RNF144AP50876 AL591742.1-201ENST00000604433 565 ntBASIC18.79■□□□□ 0.6
RNF144AP50876 AC080038.1-201ENST00000611274 1154 ntBASIC18.79■□□□□ 0.6
RNF144AP50876 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF144AP50876 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF144AP50876 GABARAPL3-202ENST00000624044 1851 ntBASIC18.79■□□□□ 0.6
RNF144AP50876 SMG8-203ENST00000578922 2178 ntBASIC18.79■□□□□ 0.6
RNF144AP50876 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF144AP50876 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF144AP50876 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF144AP50876 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF144AP50876 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF144AP50876 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF144AP50876 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF144AP50876 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF144AP50876 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF144AP50876 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF144AP50876 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF144AP50876 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF144AP50876 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.78■□□□□ 0.6
RNF144AP50876 AL137784.2-201ENST00000607332 1000 ntBASIC18.78■□□□□ 0.6
RNF144AP50876 MIR2861-201ENST00000636310 90 ntBASIC18.78■□□□□ 0.6
RNF144AP50876 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF144AP50876 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF144AP50876 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF144AP50876 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RNF144AP50876 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF144AP50876 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF144AP50876 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF144AP50876 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RNF144AP50876 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF144AP50876 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF144AP50876 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
RNF144AP50876 AC068338.2-201ENST00000563278 1430 ntBASIC18.77■□□□□ 0.6
RNF144AP50876 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RNF144AP50876 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RNF144AP50876 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF144AP50876 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF144AP50876 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF144AP50876 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RNF144AP50876 CYP2T1P-201ENST00000432607 1285 ntBASIC18.77■□□□□ 0.6
RNF144AP50876 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF144AP50876 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF144AP50876 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF144AP50876 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.77■□□□□ 0.6
RNF144AP50876 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF144AP50876 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
RNF144AP50876 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF144AP50876 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
RNF144AP50876 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RNF144AP50876 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
RNF144AP50876 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.77■□□□□ 0.59
RNF144AP50876 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.77■□□□□ 0.59
RNF144AP50876 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.77■□□□□ 0.59
RNF144AP50876 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.77■□□□□ 0.59
RNF144AP50876 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF144AP50876 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF144AP50876 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RNF144AP50876 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF144AP50876 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF144AP50876 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF144AP50876 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF144AP50876 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RNF144AP50876 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF144AP50876 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF144AP50876 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF144AP50876 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF144AP50876 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF144AP50876 AC007322.1-201ENST00000426983 750 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms