Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK3P49761 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLK3P49761 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK3P49761 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CLK3P49761 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.15■□□□□ 0.66
CLK3P49761 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
CLK3P49761 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK3P49761 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CLK3P49761 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLK3P49761 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLK3P49761 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLK3P49761 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLK3P49761 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLK3P49761 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLK3P49761 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLK3P49761 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.14■□□□□ 0.65
CLK3P49761 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CLK3P49761 MYCNOS-205ENST00000641950 531 ntBASIC19.14■□□□□ 0.65
CLK3P49761 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.14■□□□□ 0.65
CLK3P49761 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLK3P49761 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLK3P49761 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLK3P49761 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLK3P49761 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLK3P49761 AC121338.2-201ENST00000622535 1744 ntBASIC19.14■□□□□ 0.65
CLK3P49761 AC007225.1-201ENST00000566331 1836 ntBASIC19.14■□□□□ 0.65
CLK3P49761 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLK3P49761 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLK3P49761 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.13■□□□□ 0.65
CLK3P49761 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.13■□□□□ 0.65
CLK3P49761 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.13■□□□□ 0.65
CLK3P49761 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLK3P49761 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.13■□□□□ 0.65
CLK3P49761 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLK3P49761 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLK3P49761 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLK3P49761 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLK3P49761 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CLK3P49761 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.13■□□□□ 0.65
CLK3P49761 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLK3P49761 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLK3P49761 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.13■□□□□ 0.65
CLK3P49761 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.12■□□□□ 0.65
CLK3P49761 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLK3P49761 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CLK3P49761 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLK3P49761 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLK3P49761 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLK3P49761 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLK3P49761 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.12■□□□□ 0.65
CLK3P49761 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.12■□□□□ 0.65
CLK3P49761 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.12■□□□□ 0.65
CLK3P49761 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.12■□□□□ 0.65
CLK3P49761 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLK3P49761 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLK3P49761 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.12■□□□□ 0.65
CLK3P49761 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.12■□□□□ 0.65
CLK3P49761 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.12■□□□□ 0.65
CLK3P49761 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLK3P49761 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLK3P49761 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 AL162377.1-201ENST00000618844 1793 ntBASIC19.11■□□□□ 0.65
CLK3P49761 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CLK3P49761 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CLK3P49761 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.11■□□□□ 0.65
CLK3P49761 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLK3P49761 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.11■□□□□ 0.65
CLK3P49761 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.11■□□□□ 0.65
CLK3P49761 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.11■□□□□ 0.65
CLK3P49761 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CLK3P49761 AL137784.2-201ENST00000607332 1000 ntBASIC19.11■□□□□ 0.65
CLK3P49761 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.11■□□□□ 0.65
CLK3P49761 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.11■□□□□ 0.65
CLK3P49761 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.11■□□□□ 0.65
CLK3P49761 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLK3P49761 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.1■□□□□ 0.65
CLK3P49761 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLK3P49761 AL512408.1-201ENST00000569378 2000 ntBASIC19.1■□□□□ 0.65
CLK3P49761 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLK3P49761 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLK3P49761 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLK3P49761 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLK3P49761 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLK3P49761 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLK3P49761 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.1■□□□□ 0.65
CLK3P49761 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.1■□□□□ 0.65
CLK3P49761 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms