Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 NUM1YDR150W 8247 nt2.57□□□□□ -2
RFX1P48743 MLH1YMR167W 2310 nt2.57□□□□□ -2
RFX1P48743 YCR018C-AYCR018C-A 255 nt2.56□□□□□ -2
RFX1P48743 YDR048CYDR048C 315 nt2.56□□□□□ -2
RFX1P48743 EMC6YLL014W 327 nt2.56□□□□□ -2
RFX1P48743 YOR055WYOR055W 435 nt2.56□□□□□ -2
RFX1P48743 MF(ALPHA)1YPL187W 498 nt2.56□□□□□ -2
RFX1P48743 YPR099CYPR099C 357 nt2.56□□□□□ -2
RFX1P48743 BUB1YGR188C 3066 nt2.56□□□□□ -2
RFX1P48743 YBT1YLL048C 4986 nt2.56□□□□□ -2
RFX1P48743 ARP8YOR141C 2646 nt2.55□□□□□ -2
RFX1P48743 YDL211CYDL211C 1119 nt2.55□□□□□ -2
RFX1P48743 HYP2YEL034W 474 nt2.55□□□□□ -2
RFX1P48743 YGR069WYGR069W 336 nt2.55□□□□□ -2
RFX1P48743 YIL059CYIL059C 366 nt2.55□□□□□ -2
RFX1P48743 HRD3YLR207W 2502 nt2.55□□□□□ -2
RFX1P48743 LYS9YNR050C 1341 nt2.55□□□□□ -2
RFX1P48743 snR43snR43 209 nt2.55□□□□□ -2
RFX1P48743 DFG16YOR030W 1860 nt2.54□□□□□ -2
RFX1P48743 FMP16YDR070C 282 nt2.54□□□□□ -2
RFX1P48743 PHS1YJL097W 654 nt2.54□□□□□ -2
RFX1P48743 BLI1YKL061W 342 nt2.54□□□□□ -2
RFX1P48743 MRPL33YMR286W 261 nt2.54□□□□□ -2
RFX1P48743 CRS5YOR031W 210 nt2.54□□□□□ -2
RFX1P48743 RPL36BYPL249C-A 303 nt2.54□□□□□ -2
RFX1P48743 SOK2YMR016C 2358 nt2.54□□□□□ -2
RFX1P48743 VPS35YJL154C 2835 nt2.54□□□□□ -2
RFX1P48743 SIN3YOL004W 4611 nt2.53□□□□□ -2
RFX1P48743 YIL102CYIL102C 306 nt2.53□□□□□ -2
RFX1P48743 SNC2YOR327C 348 nt2.53□□□□□ -2
RFX1P48743 SDC25YLL016W 3147 nt2.53□□□□□ -2
RFX1P48743 TOF2YKR010C 2316 nt2.53□□□□□ -2
RFX1P48743 RRP12YPL012W 3687 nt2.53□□□□□ -2.01
RFX1P48743 DBP6YNR038W 1890 nt2.52□□□□□ -2.01
RFX1P48743 YGL069CYGL069C 465 nt2.52□□□□□ -2.01
RFX1P48743 YLR154W-EYLR154W-E 204 nt2.52□□□□□ -2.01
RFX1P48743 RPL36AYMR194W 303 nt2.52□□□□□ -2.01
RFX1P48743 SAR1YPL218W 573 nt2.52□□□□□ -2.01
RFX1P48743 RGA2YDR379W 3030 nt2.52□□□□□ -2.01
RFX1P48743 SNU114YKL173W 3027 nt2.52□□□□□ -2.01
RFX1P48743 YPP1YGR198W 2454 nt2.51□□□□□ -2.01
RFX1P48743 BFA1YJR053W 1725 nt2.51□□□□□ -2.01
RFX1P48743 PAN3YKL025C 2040 nt2.51□□□□□ -2.01
RFX1P48743 RIM20YOR275C 1986 nt2.51□□□□□ -2.01
RFX1P48743 YHL041WYHL041W 450 nt2.51□□□□□ -2.01
RFX1P48743 YIL156W-BYIL156W-B 222 nt2.51□□□□□ -2.01
RFX1P48743 YLR053CYLR053C 327 nt2.51□□□□□ -2.01
RFX1P48743 YMR046W-AYMR046W-A 129 nt2.51□□□□□ -2.01
RFX1P48743 YOR225WYOR225W 330 nt2.51□□□□□ -2.01
RFX1P48743 VMA9YCL005W-A 222 nt2.51□□□□□ -2.01
RFX1P48743 SSN2YDR443C 4263 nt2.51□□□□□ -2.01
RFX1P48743 ALK2YBL009W 2031 nt2.51□□□□□ -2.01
RFX1P48743 PHO91YNR013C 2685 nt2.5□□□□□ -2.01
RFX1P48743 SUL1YBR294W 2580 nt2.5□□□□□ -2.01
RFX1P48743 ALG13YGL047W 609 nt2.5□□□□□ -2.01
RFX1P48743 SMD1YGR074W 441 nt2.5□□□□□ -2.01
RFX1P48743 SPF1YEL031W 3648 nt2.49□□□□□ -2.01
RFX1P48743 VPS16YPL045W 2397 nt2.49□□□□□ -2.01
RFX1P48743 YAL042C-AYAL042C-A 378 nt2.49□□□□□ -2.01
RFX1P48743 YOR008C-AYOR008C-A 225 nt2.49□□□□□ -2.01
RFX1P48743 YDR186CYDR186C 2634 nt2.49□□□□□ -2.01
RFX1P48743 KAP123YER110C 3342 nt2.48□□□□□ -2.01
RFX1P48743 YDL062WYDL062W 426 nt2.48□□□□□ -2.01
RFX1P48743 snR80snR80 171 nt2.48□□□□□ -2.01
RFX1P48743 NOP10YHR072W-A 177 nt2.48□□□□□ -2.01
RFX1P48743 YAL059C-AYAL059C-A 423 nt2.48□□□□□ -2.01
RFX1P48743 DAD3YBR233W-A 285 nt2.48□□□□□ -2.01
RFX1P48743 snR49snR49 165 nt2.48□□□□□ -2.01
RFX1P48743 YDR239CYDR239C 2364 nt2.47□□□□□ -2.01
RFX1P48743 PDR11YIL013C 4236 nt2.47□□□□□ -2.01
RFX1P48743 GUP1YGL084C 1683 nt2.47□□□□□ -2.01
RFX1P48743 STE11YLR362W 2154 nt2.47□□□□□ -2.01
RFX1P48743 TAE2YPL009C 3117 nt2.47□□□□□ -2.01
RFX1P48743 TMN3YER113C 2121 nt2.47□□□□□ -2.01
RFX1P48743 CDC36YDL165W 576 nt2.47□□□□□ -2.01
RFX1P48743 YHL042WYHL042W 453 nt2.47□□□□□ -2.01
RFX1P48743 YIL032CYIL032C 357 nt2.47□□□□□ -2.01
RFX1P48743 RPL38YLR325C 237 nt2.47□□□□□ -2.01
RFX1P48743 ARP7YPR034W 1434 nt2.47□□□□□ -2.01
RFX1P48743 MSB1YOR188W 3414 nt2.47□□□□□ -2.01
RFX1P48743 SMC6YLR383W 3345 nt2.47□□□□□ -2.01
RFX1P48743 RAD61YDR014W 1944 nt2.46□□□□□ -2.02
RFX1P48743 YIL080WYIL080W 4722 nt2.46□□□□□ -2.02
RFX1P48743 PRE4YFR050C 801 nt2.46□□□□□ -2.02
RFX1P48743 ACB1YGR037C 264 nt2.46□□□□□ -2.02
RFX1P48743 VPS13YLL040C 9435 nt2.46□□□□□ -2.02
RFX1P48743 COG8YML071C 1824 nt2.46□□□□□ -2.02
RFX1P48743 INP53YOR109W 3324 nt2.45□□□□□ -2.02
RFX1P48743 NPC2YDL046W 522 nt2.45□□□□□ -2.02
RFX1P48743 YFH1YDL120W 525 nt2.45□□□□□ -2.02
RFX1P48743 YEL020C-BYEL020C-B 198 nt2.45□□□□□ -2.02
RFX1P48743 HHT1YBR010W 411 nt2.45□□□□□ -2.02
RFX1P48743 YBR277CYBR277C 402 nt2.45□□□□□ -2.02
RFX1P48743 RIC1YLR039C 3171 nt2.45□□□□□ -2.02
RFX1P48743 PEX8YGR077C 1770 nt2.45□□□□□ -2.02
RFX1P48743 SMY1YKL079W 1971 nt2.45□□□□□ -2.02
RFX1P48743 SVL3YPL032C 2478 nt2.44□□□□□ -2.02
RFX1P48743 YDR406W-AYDR406W-A 246 nt2.44□□□□□ -2.02
RFX1P48743 RPA34YJL148W 702 nt2.44□□□□□ -2.02
RFX1P48743 PCC1YKR095W-A 267 nt2.44□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 25.8 ms