Protein–RNA interactions for Protein: P47013

LCB3, Dihydrosphingosine 1-phosphate phosphatase LCB3, yeastyeast

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB3P47013 YPR012WYPR012W 255 nt1.72□□□□□ -2.13
LCB3P47013 DOT6YER088C 2013 nt1.72□□□□□ -2.13
LCB3P47013 YDR341CYDR341C 1824 nt1.72□□□□□ -2.13
LCB3P47013 VTC3YPL019C 2508 nt1.72□□□□□ -2.13
LCB3P47013 UBP2YOR124C 3819 nt1.72□□□□□ -2.13
LCB3P47013 SIR4YDR227W 4077 nt1.71□□□□□ -2.13
LCB3P47013 GRR1YJR090C 3456 nt1.71□□□□□ -2.14
LCB3P47013 HMRA1YCR097W 381 nt1.71□□□□□ -2.14
LCB3P47013 YDL152WYDL152W 366 nt1.71□□□□□ -2.14
LCB3P47013 BTT1YDR252W 450 nt1.71□□□□□ -2.14
LCB3P47013 RTT102YGR275W 474 nt1.71□□□□□ -2.14
LCB3P47013 YHR071C-AYHR071C-A 321 nt1.71□□□□□ -2.14
LCB3P47013 PAU14YIL176C 363 nt1.71□□□□□ -2.14
LCB3P47013 PAU1YJL223C 363 nt1.71□□□□□ -2.14
LCB3P47013 PGA1YNL158W 597 nt1.71□□□□□ -2.14
LCB3P47013 YBL083CYBL083C 426 nt1.71□□□□□ -2.14
LCB3P47013 YPL182CYPL182C 384 nt1.71□□□□□ -2.14
LCB3P47013 YPR099CYPR099C 357 nt1.71□□□□□ -2.14
LCB3P47013 YPR170W-AYPR170W-A 186 nt1.71□□□□□ -2.14
LCB3P47013 APL5YPL195W 2799 nt1.7□□□□□ -2.14
LCB3P47013 SPP41YDR464W 4308 nt1.7□□□□□ -2.14
LCB3P47013 NOP14YDL148C 2433 nt1.7□□□□□ -2.14
LCB3P47013 YDL062WYDL062W 426 nt1.7□□□□□ -2.14
LCB3P47013 YAL068W-AYAL068W-A 255 nt1.7□□□□□ -2.14
LCB3P47013 YLR434CYLR434C 384 nt1.7□□□□□ -2.14
LCB3P47013 RPL36BYPL249C-A 303 nt1.7□□□□□ -2.14
LCB3P47013 GCN2YDR283C 4980 nt1.7□□□□□ -2.14
LCB3P47013 SNF5YBR289W 2718 nt1.7□□□□□ -2.14
LCB3P47013 SYH1YPL105C 2550 nt1.69□□□□□ -2.14
LCB3P47013 SAP190YKR028W 3102 nt1.69□□□□□ -2.14
LCB3P47013 YBR184WYBR184W 1572 nt1.69□□□□□ -2.14
LCB3P47013 SEF1YBL066C 3447 nt1.69□□□□□ -2.14
LCB3P47013 RPL37BYDR500C 267 nt1.69□□□□□ -2.14
LCB3P47013 YGL239CYGL239C 315 nt1.69□□□□□ -2.14
LCB3P47013 YJL052C-AYJL052C-A 120 nt1.69□□□□□ -2.14
LCB3P47013 BSC3YLR465C 309 nt1.69□□□□□ -2.14
LCB3P47013 CYB5YNL111C 363 nt1.69□□□□□ -2.14
LCB3P47013 SLM1YIL105C 2061 nt1.69□□□□□ -2.14
LCB3P47013 FKS1YLR342W 5631 nt1.68□□□□□ -2.14
LCB3P47013 NUP170YBL079W 4509 nt1.68□□□□□ -2.14
LCB3P47013 PAN3YKL025C 2040 nt1.68□□□□□ -2.14
LCB3P47013 YCR043CYCR043C 384 nt1.68□□□□□ -2.14
LCB3P47013 GCN4YEL009C 846 nt1.68□□□□□ -2.14
LCB3P47013 UBP1YDL122W 2430 nt1.68□□□□□ -2.14
LCB3P47013 GNT1YOR320C 1476 nt1.68□□□□□ -2.14
LCB3P47013 CHC1YGL206C 4962 nt1.67□□□□□ -2.14
LCB3P47013 ZRG8YER033C 3231 nt1.67□□□□□ -2.14
LCB3P47013 VPS41YDR080W 2979 nt1.67□□□□□ -2.14
LCB3P47013 DGR1YNL130C-A 147 nt1.67□□□□□ -2.14
LCB3P47013 NEO1YIL048W 3456 nt1.67□□□□□ -2.14
LCB3P47013 NAM7YMR080C 2916 nt1.67□□□□□ -2.14
LCB3P47013 RPH1YER169W 2391 nt1.66□□□□□ -2.14
LCB3P47013 BRE1YDL074C 2103 nt1.66□□□□□ -2.14
LCB3P47013 PLC1YPL268W 2610 nt1.66□□□□□ -2.14
LCB3P47013 YDL011CYDL011C 324 nt1.66□□□□□ -2.14
LCB3P47013 UTP22YGR090W 3714 nt1.66□□□□□ -2.14
LCB3P47013 DIS3YOL021C 3006 nt1.66□□□□□ -2.14
LCB3P47013 TOF2YKR010C 2316 nt1.66□□□□□ -2.14
LCB3P47013 ALK2YBL009W 2031 nt1.66□□□□□ -2.14
LCB3P47013 CAT2YML042W 2013 nt1.66□□□□□ -2.14
LCB3P47013 PET309YLR067C 2898 nt1.65□□□□□ -2.14
LCB3P47013 YCR087C-AYCR087C-A 462 nt1.65□□□□□ -2.15
LCB3P47013 YIL066W-AYIL066W-A 444 nt1.65□□□□□ -2.15
LCB3P47013 YLR334CYLR334C 381 nt1.65□□□□□ -2.15
LCB3P47013 MF(ALPHA)1YPL187W 498 nt1.65□□□□□ -2.15
LCB3P47013 AGC1YPR021C 2709 nt1.65□□□□□ -2.15
LCB3P47013 ARP7YPR034W 1434 nt1.65□□□□□ -2.15
LCB3P47013 TOR2YKL203C 7425 nt1.64□□□□□ -2.15
LCB3P47013 snR56snR56 88 nt1.64□□□□□ -2.15
LCB3P47013 WIP1YDR374W-A 270 nt1.64□□□□□ -2.15
LCB3P47013 RPS24AYER074W 408 nt1.64□□□□□ -2.15
LCB3P47013 BRP1YGL007W 378 nt1.64□□□□□ -2.15
LCB3P47013 DAS1YJL149W 1992 nt1.64□□□□□ -2.15
LCB3P47013 BUD2YKL092C 3315 nt1.64□□□□□ -2.15
LCB3P47013 IRR1YIL026C 3453 nt1.63□□□□□ -2.15
LCB3P47013 PUT3YKL015W 2940 nt1.63□□□□□ -2.15
LCB3P47013 YCR102W-AYCR102W-A 198 nt1.63□□□□□ -2.15
LCB3P47013 YKL183C-AYKL183C-A 213 nt1.63□□□□□ -2.15
LCB3P47013 TMA7YLR262C-A 195 nt1.63□□□□□ -2.15
LCB3P47013 CGI121YML036W 546 nt1.63□□□□□ -2.15
LCB3P47013 YPP1YGR198W 2454 nt1.63□□□□□ -2.15
LCB3P47013 HER1YOR227W 3741 nt1.63□□□□□ -2.15
LCB3P47013 ATG9YDL149W 2994 nt1.62□□□□□ -2.15
LCB3P47013 YJR098CYJR098C 1971 nt1.62□□□□□ -2.15
LCB3P47013 VTC1YER072W 390 nt1.62□□□□□ -2.15
LCB3P47013 RPA34YJL148W 702 nt1.62□□□□□ -2.15
LCB3P47013 YAR047CYAR047C 321 nt1.62□□□□□ -2.15
LCB3P47013 RPL9BYNL067W 576 nt1.62□□□□□ -2.15
LCB3P47013 YDR008CYDR008C 351 nt1.61□□□□□ -2.15
LCB3P47013 ATG31YDR022C 591 nt1.61□□□□□ -2.15
LCB3P47013 ATP6Q0085 780 nt1.61□□□□□ -2.15
LCB3P47013 YHL046W-AYHL046W-A 327 nt1.61□□□□□ -2.15
LCB3P47013 RPL42BYHR141C 321 nt1.61□□□□□ -2.15
LCB3P47013 YNL114CYNL114C 372 nt1.61□□□□□ -2.15
LCB3P47013 RPL42AYNL162W 321 nt1.61□□□□□ -2.15
LCB3P47013 RPL32YBL092W 393 nt1.61□□□□□ -2.15
LCB3P47013 YOR121CYOR121C 306 nt1.61□□□□□ -2.15
LCB3P47013 PDR8YLR266C 2106 nt1.61□□□□□ -2.15
LCB3P47013 KOG1YHR186C 4674 nt1.6□□□□□ -2.15
LCB3P47013 TIM13YGR181W 318 nt1.6□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 1353.9 ms