Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL35P42766 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL35P42766 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RPL35P42766 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RPL35P42766 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL35P42766 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPL35P42766 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.3■□□□□ 0.2
RPL35P42766 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.3■□□□□ 0.2
RPL35P42766 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.3■□□□□ 0.2
RPL35P42766 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPL35P42766 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.3■□□□□ 0.2
RPL35P42766 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL35P42766 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.3■□□□□ 0.2
RPL35P42766 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.3■□□□□ 0.2
RPL35P42766 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.3■□□□□ 0.2
RPL35P42766 SNX5-217ENST00000606557 1087 ntBASIC16.3■□□□□ 0.2
RPL35P42766 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.3■□□□□ 0.2
RPL35P42766 AC129492.7-201ENST00000622992 756 ntBASIC16.3■□□□□ 0.2
RPL35P42766 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL35P42766 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL35P42766 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL35P42766 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL35P42766 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.3■□□□□ 0.2
RPL35P42766 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.3■□□□□ 0.2
RPL35P42766 AL049796.1-201ENST00000565336 1766 ntBASIC16.3■□□□□ 0.2
RPL35P42766 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.3■□□□□ 0.2
RPL35P42766 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL35P42766 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.3■□□□□ 0.2
RPL35P42766 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL35P42766 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPL35P42766 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RPL35P42766 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
RPL35P42766 C17orf82-201ENST00000623772 1530 ntBASIC16.29■□□□□ 0.2
RPL35P42766 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.29■□□□□ 0.2
RPL35P42766 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.29■□□□□ 0.2
RPL35P42766 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 AC139795.1-202ENST00000500444 432 ntBASIC16.29■□□□□ 0.2
RPL35P42766 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.29■□□□□ 0.2
RPL35P42766 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.29■□□□□ 0.2
RPL35P42766 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.29■□□□□ 0.2
RPL35P42766 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RPL35P42766 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPL35P42766 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.29■□□□□ 0.2
RPL35P42766 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL35P42766 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL35P42766 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.28■□□□□ 0.2
RPL35P42766 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RPL35P42766 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL35P42766 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.28■□□□□ 0.2
RPL35P42766 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RPL35P42766 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RPL35P42766 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPL35P42766 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RPL35P42766 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.28■□□□□ 0.2
RPL35P42766 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.28■□□□□ 0.2
RPL35P42766 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RPL35P42766 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.28■□□□□ 0.2
RPL35P42766 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.28■□□□□ 0.2
RPL35P42766 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL35P42766 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RPL35P42766 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL35P42766 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.28■□□□□ 0.2
RPL35P42766 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.28■□□□□ 0.2
RPL35P42766 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.28■□□□□ 0.2
RPL35P42766 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL35P42766 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL35P42766 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.28■□□□□ 0.2
RPL35P42766 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL35P42766 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPL35P42766 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RPL35P42766 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPL35P42766 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
RPL35P42766 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RPL35P42766 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.27■□□□□ 0.2
RPL35P42766 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.27■□□□□ 0.2
RPL35P42766 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPL35P42766 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPL35P42766 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPL35P42766 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPL35P42766 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.27■□□□□ 0.2
RPL35P42766 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.27■□□□□ 0.2
RPL35P42766 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.27■□□□□ 0.2
RPL35P42766 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RPL35P42766 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RPL35P42766 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
RPL35P42766 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPL35P42766 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms