Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSP1P33241 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
LSP1P33241 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSP1P33241 AC010525.1-201ENST00000585559 441 ntBASIC20.33■□□□□ 0.85
LSP1P33241 AL117332.1-201ENST00000622628 974 ntBASIC20.33■□□□□ 0.85
LSP1P33241 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.33■□□□□ 0.84
LSP1P33241 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LSP1P33241 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
LSP1P33241 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LSP1P33241 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LSP1P33241 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LSP1P33241 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LSP1P33241 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.32■□□□□ 0.84
LSP1P33241 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.32■□□□□ 0.84
LSP1P33241 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.32■□□□□ 0.84
LSP1P33241 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSP1P33241 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSP1P33241 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSP1P33241 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSP1P33241 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.32■□□□□ 0.84
LSP1P33241 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.32■□□□□ 0.84
LSP1P33241 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSP1P33241 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSP1P33241 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSP1P33241 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LSP1P33241 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSP1P33241 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSP1P33241 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.31■□□□□ 0.84
LSP1P33241 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSP1P33241 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSP1P33241 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LSP1P33241 AC092028.1-203ENST00000608262 953 ntBASIC20.31■□□□□ 0.84
LSP1P33241 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.31■□□□□ 0.84
LSP1P33241 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSP1P33241 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.31■□□□□ 0.84
LSP1P33241 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.31■□□□□ 0.84
LSP1P33241 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.31■□□□□ 0.84
LSP1P33241 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSP1P33241 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSP1P33241 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
LSP1P33241 AC120498.9-201ENST00000339021 3867 ntBASIC20.3■□□□□ 0.84
LSP1P33241 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSP1P33241 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSP1P33241 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSP1P33241 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSP1P33241 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSP1P33241 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSP1P33241 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.3■□□□□ 0.84
LSP1P33241 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSP1P33241 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSP1P33241 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.3■□□□□ 0.84
LSP1P33241 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.3■□□□□ 0.84
LSP1P33241 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LSP1P33241 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LSP1P33241 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LSP1P33241 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LSP1P33241 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LSP1P33241 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LSP1P33241 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LSP1P33241 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LSP1P33241 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSP1P33241 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSP1P33241 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSP1P33241 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSP1P33241 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.29■□□□□ 0.84
LSP1P33241 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LSP1P33241 MTDHP2-201ENST00000601468 714 ntBASIC20.29■□□□□ 0.84
LSP1P33241 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.29■□□□□ 0.84
LSP1P33241 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.29■□□□□ 0.84
LSP1P33241 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
LSP1P33241 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSP1P33241 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LSP1P33241 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSP1P33241 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSP1P33241 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LSP1P33241 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSP1P33241 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSP1P33241 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.28■□□□□ 0.84
LSP1P33241 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSP1P33241 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSP1P33241 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LSP1P33241 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSP1P33241 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LSP1P33241 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
LSP1P33241 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.28■□□□□ 0.84
LSP1P33241 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.28■□□□□ 0.84
LSP1P33241 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSP1P33241 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.28■□□□□ 0.84
LSP1P33241 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LSP1P33241 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
LSP1P33241 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSP1P33241 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
LSP1P33241 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSP1P33241 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LSP1P33241 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LSP1P33241 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LSP1P33241 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LSP1P33241 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LSP1P33241 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSP1P33241 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms