Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.54■□□□□ 0.56
SHC1P29353 AL162412.1-201ENST00000567129 965 ntBASIC18.54■□□□□ 0.56
SHC1P29353 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SHC1P29353 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC1P29353 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHC1P29353 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SHC1P29353 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SHC1P29353 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC1P29353 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC1P29353 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC1P29353 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC1P29353 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC1P29353 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC1P29353 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHC1P29353 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.53■□□□□ 0.56
SHC1P29353 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.53■□□□□ 0.56
SHC1P29353 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SHC1P29353 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.53■□□□□ 0.56
SHC1P29353 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.53■□□□□ 0.56
SHC1P29353 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.53■□□□□ 0.56
SHC1P29353 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SHC1P29353 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.53■□□□□ 0.56
SHC1P29353 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SHC1P29353 FAM21FP-204ENST00000608637 956 ntBASIC18.53■□□□□ 0.56
SHC1P29353 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.53■□□□□ 0.56
SHC1P29353 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC1P29353 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC1P29353 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
SHC1P29353 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
SHC1P29353 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC1P29353 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC1P29353 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC1P29353 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SHC1P29353 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SHC1P29353 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SHC1P29353 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.52■□□□□ 0.56
SHC1P29353 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.52■□□□□ 0.56
SHC1P29353 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHC1P29353 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHC1P29353 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHC1P29353 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHC1P29353 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHC1P29353 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHC1P29353 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHC1P29353 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.52■□□□□ 0.56
SHC1P29353 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHC1P29353 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.52■□□□□ 0.56
SHC1P29353 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.52■□□□□ 0.56
SHC1P29353 AC069236.1-201ENST00000604339 616 ntBASIC18.52■□□□□ 0.56
SHC1P29353 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SHC1P29353 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHC1P29353 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHC1P29353 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SHC1P29353 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHC1P29353 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.52■□□□□ 0.56
SHC1P29353 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SHC1P29353 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SHC1P29353 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SHC1P29353 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC1P29353 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.51■□□□□ 0.55
SHC1P29353 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.51■□□□□ 0.55
SHC1P29353 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHC1P29353 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.51■□□□□ 0.55
SHC1P29353 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC1P29353 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.51■□□□□ 0.55
SHC1P29353 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC1P29353 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.51■□□□□ 0.55
SHC1P29353 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHC1P29353 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC1P29353 NCF1B-203ENST00000435988 1254 ntBASIC18.51■□□□□ 0.55
SHC1P29353 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.51■□□□□ 0.55
SHC1P29353 AC105036.2-201ENST00000569468 176 ntBASIC18.51■□□□□ 0.55
SHC1P29353 AC133552.2-202ENST00000575694 574 ntBASIC18.51■□□□□ 0.55
SHC1P29353 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC1P29353 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHC1P29353 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC1P29353 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC1P29353 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHC1P29353 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SHC1P29353 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC1P29353 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.5■□□□□ 0.55
SHC1P29353 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC1P29353 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.5■□□□□ 0.55
SHC1P29353 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHC1P29353 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.5■□□□□ 0.55
SHC1P29353 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.5■□□□□ 0.55
SHC1P29353 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC1P29353 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHC1P29353 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.5■□□□□ 0.55
SHC1P29353 GUSBP6-202ENST00000438529 1198 ntBASIC18.5■□□□□ 0.55
SHC1P29353 AC083906.2-201ENST00000511578 360 ntBASIC18.5■□□□□ 0.55
SHC1P29353 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC1P29353 AL121832.2-201ENST00000610979 668 ntBASIC18.5■□□□□ 0.55
SHC1P29353 OR10C1-204ENST00000622521 1039 ntBASIC18.5■□□□□ 0.55
SHC1P29353 AC008694.1-202ENST00000636953 945 ntBASIC18.5■□□□□ 0.55
SHC1P29353 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHC1P29353 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC1P29353 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.5■□□□□ 0.55
SHC1P29353 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHC1P29353 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms