Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN6P29350 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN6P29350 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.23■□□□□ 0.67
PTPN6P29350 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.23■□□□□ 0.67
PTPN6P29350 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN6P29350 UBE2DNL-204ENST00000602536 740 ntBASIC19.23■□□□□ 0.67
PTPN6P29350 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN6P29350 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN6P29350 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN6P29350 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN6P29350 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN6P29350 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN6P29350 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN6P29350 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 AC125437.2-201ENST00000625180 2167 ntBASIC19.22■□□□□ 0.67
PTPN6P29350 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 AC091799.1-201ENST00000422823 811 ntBASIC19.22■□□□□ 0.67
PTPN6P29350 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 KRT18P20-201ENST00000548986 1279 ntBASIC19.22■□□□□ 0.67
PTPN6P29350 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN6P29350 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 BID-214ENST00000617586 542 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPN6P29350 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.22■□□□□ 0.67
PTPN6P29350 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPN6P29350 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PTPN6P29350 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
PTPN6P29350 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN6P29350 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN6P29350 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN6P29350 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN6P29350 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN6P29350 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN6P29350 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN6P29350 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN6P29350 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN6P29350 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN6P29350 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN6P29350 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
PTPN6P29350 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN6P29350 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN6P29350 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN6P29350 AC080038.1-201ENST00000611274 1154 ntBASIC19.21■□□□□ 0.67
PTPN6P29350 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN6P29350 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN6P29350 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN6P29350 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN6P29350 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN6P29350 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN6P29350 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN6P29350 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PTPN6P29350 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPN6P29350 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPN6P29350 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PTPN6P29350 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPN6P29350 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PTPN6P29350 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPN6P29350 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPN6P29350 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.2■□□□□ 0.66
PTPN6P29350 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 AC243732.1-201ENST00000612648 864 ntBASIC19.2■□□□□ 0.66
PTPN6P29350 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.2■□□□□ 0.66
PTPN6P29350 MYCNOS-205ENST00000641950 531 ntBASIC19.2■□□□□ 0.66
PTPN6P29350 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN6P29350 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PTPN6P29350 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN6P29350 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PTPN6P29350 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN6P29350 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN6P29350 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTPN6P29350 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPN6P29350 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN6P29350 RBM17P2-201ENST00000616397 1405 ntBASIC19.19■□□□□ 0.66
PTPN6P29350 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTPN6P29350 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms