Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCD3P28288 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCD3P28288 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ABCD3P28288 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCD3P28288 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.68■□□□□ 0.58
ABCD3P28288 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.68■□□□□ 0.58
ABCD3P28288 AC083880.1-201ENST00000608266 535 ntBASIC18.68■□□□□ 0.58
ABCD3P28288 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCD3P28288 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ABCD3P28288 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCD3P28288 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ABCD3P28288 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ABCD3P28288 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
ABCD3P28288 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCD3P28288 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCD3P28288 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.67■□□□□ 0.58
ABCD3P28288 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCD3P28288 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCD3P28288 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCD3P28288 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCD3P28288 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCD3P28288 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ABCD3P28288 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCD3P28288 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.67■□□□□ 0.58
ABCD3P28288 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCD3P28288 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.67■□□□□ 0.58
ABCD3P28288 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.67■□□□□ 0.58
ABCD3P28288 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ABCD3P28288 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.67■□□□□ 0.58
ABCD3P28288 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.67■□□□□ 0.58
ABCD3P28288 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCD3P28288 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCD3P28288 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ABCD3P28288 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCD3P28288 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCD3P28288 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCD3P28288 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.66■□□□□ 0.58
ABCD3P28288 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ABCD3P28288 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.66■□□□□ 0.58
ABCD3P28288 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.66■□□□□ 0.58
ABCD3P28288 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ABCD3P28288 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ABCD3P28288 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCD3P28288 AC092720.2-201ENST00000602388 1665 ntBASIC18.66■□□□□ 0.58
ABCD3P28288 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCD3P28288 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.66■□□□□ 0.58
ABCD3P28288 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCD3P28288 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.65■□□□□ 0.58
ABCD3P28288 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCD3P28288 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCD3P28288 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.65■□□□□ 0.58
ABCD3P28288 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCD3P28288 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.65■□□□□ 0.58
ABCD3P28288 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ABCD3P28288 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCD3P28288 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ABCD3P28288 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCD3P28288 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ABCD3P28288 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.65■□□□□ 0.58
ABCD3P28288 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ABCD3P28288 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.65■□□□□ 0.58
ABCD3P28288 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.65■□□□□ 0.58
ABCD3P28288 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ABCD3P28288 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCD3P28288 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCD3P28288 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ABCD3P28288 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.64■□□□□ 0.58
ABCD3P28288 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCD3P28288 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD3P28288 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
ABCD3P28288 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.64■□□□□ 0.57
ABCD3P28288 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCD3P28288 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD3P28288 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ABCD3P28288 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.64■□□□□ 0.57
ABCD3P28288 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCD3P28288 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.64■□□□□ 0.57
ABCD3P28288 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCD3P28288 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD3P28288 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD3P28288 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCD3P28288 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.64■□□□□ 0.57
ABCD3P28288 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD3P28288 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCD3P28288 AC073314.1-201ENST00000568729 2216 ntBASIC18.64■□□□□ 0.57
ABCD3P28288 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD3P28288 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD3P28288 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ABCD3P28288 FEM1AP1-201ENST00000431297 1995 ntBASIC18.63■□□□□ 0.57
ABCD3P28288 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD3P28288 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD3P28288 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD3P28288 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD3P28288 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCD3P28288 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ABCD3P28288 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ABCD3P28288 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ABCD3P28288 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.63■□□□□ 0.57
ABCD3P28288 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCD3P28288 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms