Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN3P20807 KRT18P14-201ENST00000534205 1250 ntBASIC19.47■□□□□ 0.71
CAPN3P20807 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.47■□□□□ 0.71
CAPN3P20807 MIR2861-201ENST00000636310 90 ntBASIC19.47■□□□□ 0.71
CAPN3P20807 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CAPN3P20807 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN3P20807 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN3P20807 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN3P20807 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN3P20807 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CAPN3P20807 AL158211.5-201ENST00000623583 2518 ntBASIC19.47■□□□□ 0.71
CAPN3P20807 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CAPN3P20807 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN3P20807 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN3P20807 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.46■□□□□ 0.71
CAPN3P20807 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CAPN3P20807 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.46■□□□□ 0.71
CAPN3P20807 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.46■□□□□ 0.71
CAPN3P20807 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.46■□□□□ 0.71
CAPN3P20807 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN3P20807 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.46■□□□□ 0.71
CAPN3P20807 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.46■□□□□ 0.71
CAPN3P20807 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.46■□□□□ 0.71
CAPN3P20807 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CAPN3P20807 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CAPN3P20807 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CAPN3P20807 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN3P20807 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CAPN3P20807 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN3P20807 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
CAPN3P20807 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CAPN3P20807 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CAPN3P20807 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.45■□□□□ 0.7
CAPN3P20807 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CAPN3P20807 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.45■□□□□ 0.7
CAPN3P20807 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.45■□□□□ 0.7
CAPN3P20807 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.45■□□□□ 0.7
CAPN3P20807 TMEM191A-211ENST00000637163 1067 ntBASIC19.45■□□□□ 0.7
CAPN3P20807 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CAPN3P20807 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CAPN3P20807 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN3P20807 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN3P20807 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CAPN3P20807 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CAPN3P20807 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN3P20807 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.44■□□□□ 0.7
CAPN3P20807 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.44■□□□□ 0.7
CAPN3P20807 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.44■□□□□ 0.7
CAPN3P20807 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN3P20807 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN3P20807 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN3P20807 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
CAPN3P20807 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPN3P20807 AC245052.3-201ENST00000450182 901 ntBASIC19.44■□□□□ 0.7
CAPN3P20807 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN3P20807 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.44■□□□□ 0.7
CAPN3P20807 TERF1P2-201ENST00000583350 1212 ntBASIC19.44■□□□□ 0.7
CAPN3P20807 AC080038.1-201ENST00000611274 1154 ntBASIC19.44■□□□□ 0.7
CAPN3P20807 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CAPN3P20807 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN3P20807 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.44■□□□□ 0.7
CAPN3P20807 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN3P20807 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN3P20807 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CAPN3P20807 KRT16P2-201ENST00000414673 1423 ntBASIC19.43■□□□□ 0.7
CAPN3P20807 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN3P20807 KRT87P-202ENST00000534226 1464 ntBASIC19.43■□□□□ 0.7
CAPN3P20807 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN3P20807 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.43■□□□□ 0.7
CAPN3P20807 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.43■□□□□ 0.7
CAPN3P20807 ABHD17AP1-201ENST00000358206 933 ntBASIC19.43■□□□□ 0.7
CAPN3P20807 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.43■□□□□ 0.7
CAPN3P20807 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.43■□□□□ 0.7
CAPN3P20807 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN3P20807 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN3P20807 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN3P20807 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.43■□□□□ 0.7
CAPN3P20807 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CAPN3P20807 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN3P20807 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.43■□□□□ 0.7
CAPN3P20807 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CAPN3P20807 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CAPN3P20807 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.42■□□□□ 0.7
CAPN3P20807 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN3P20807 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms