Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF4P18848 AC018470.1-201ENST00000624790 3129 ntBASIC16.87■□□□□ 0.29
ATF4P18848 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATF4P18848 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATF4P18848 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.87■□□□□ 0.29
ATF4P18848 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATF4P18848 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF4P18848 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.87■□□□□ 0.29
ATF4P18848 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATF4P18848 AP005212.1-201ENST00000581547 1997 ntBASIC16.87■□□□□ 0.29
ATF4P18848 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF4P18848 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF4P18848 FP325331.1-202ENST00000623531 1380 ntBASIC16.87■□□□□ 0.29
ATF4P18848 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF4P18848 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ATF4P18848 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.87■□□□□ 0.29
ATF4P18848 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ATF4P18848 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ATF4P18848 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF4P18848 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF4P18848 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATF4P18848 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
ATF4P18848 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.86■□□□□ 0.29
ATF4P18848 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
ATF4P18848 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
ATF4P18848 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.86■□□□□ 0.29
ATF4P18848 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.86■□□□□ 0.29
ATF4P18848 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.86■□□□□ 0.29
ATF4P18848 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.86■□□□□ 0.29
ATF4P18848 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.86■□□□□ 0.29
ATF4P18848 AC009086.3-201ENST00000623486 1008 ntBASIC16.86■□□□□ 0.29
ATF4P18848 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATF4P18848 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ATF4P18848 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.86■□□□□ 0.29
ATF4P18848 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.86■□□□□ 0.29
ATF4P18848 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.86■□□□□ 0.29
ATF4P18848 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
ATF4P18848 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATF4P18848 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATF4P18848 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ATF4P18848 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATF4P18848 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATF4P18848 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
ATF4P18848 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ATF4P18848 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
ATF4P18848 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATF4P18848 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ATF4P18848 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.85■□□□□ 0.29
ATF4P18848 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.85■□□□□ 0.29
ATF4P18848 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ATF4P18848 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATF4P18848 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATF4P18848 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ATF4P18848 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ATF4P18848 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATF4P18848 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.84■□□□□ 0.29
ATF4P18848 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.84■□□□□ 0.29
ATF4P18848 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.84■□□□□ 0.29
ATF4P18848 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF4P18848 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF4P18848 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF4P18848 AC099398.1-201ENST00000567919 2776 ntBASIC16.84■□□□□ 0.29
ATF4P18848 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ATF4P18848 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.84■□□□□ 0.29
ATF4P18848 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.84■□□□□ 0.29
ATF4P18848 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF4P18848 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.84■□□□□ 0.29
ATF4P18848 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF4P18848 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.84■□□□□ 0.29
ATF4P18848 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
ATF4P18848 AC093503.3-201ENST00000624917 2352 ntBASIC16.84■□□□□ 0.29
ATF4P18848 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.84■□□□□ 0.29
ATF4P18848 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.84■□□□□ 0.29
ATF4P18848 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.84■□□□□ 0.29
ATF4P18848 MTDHP2-201ENST00000601468 714 ntBASIC16.84■□□□□ 0.29
ATF4P18848 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF4P18848 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF4P18848 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF4P18848 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ATF4P18848 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF4P18848 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.84■□□□□ 0.29
ATF4P18848 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF4P18848 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF4P18848 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ATF4P18848 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF4P18848 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms