Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC2P18074 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.88■□□□□ 0.93
ERCC2P18074 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ERCC2P18074 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.88■□□□□ 0.93
ERCC2P18074 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC2P18074 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.88■□□□□ 0.93
ERCC2P18074 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC2P18074 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.88■□□□□ 0.93
ERCC2P18074 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.88■□□□□ 0.93
ERCC2P18074 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC2P18074 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.88■□□□□ 0.93
ERCC2P18074 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ERCC2P18074 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.88■□□□□ 0.93
ERCC2P18074 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.87■□□□□ 0.93
ERCC2P18074 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.87■□□□□ 0.93
ERCC2P18074 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
ERCC2P18074 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ERCC2P18074 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.87■□□□□ 0.93
ERCC2P18074 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.87■□□□□ 0.93
ERCC2P18074 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.87■□□□□ 0.93
ERCC2P18074 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.87■□□□□ 0.93
ERCC2P18074 AL589743.5-201ENST00000616611 1050 ntBASIC20.87■□□□□ 0.93
ERCC2P18074 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.87■□□□□ 0.93
ERCC2P18074 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC2P18074 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC2P18074 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.86■□□□□ 0.93
ERCC2P18074 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC2P18074 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC2P18074 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC2P18074 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC2P18074 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.86■□□□□ 0.93
ERCC2P18074 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.86■□□□□ 0.93
ERCC2P18074 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC2P18074 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.86■□□□□ 0.93
ERCC2P18074 GPX1P1-201ENST00000388829 606 ntBASIC20.86■□□□□ 0.93
ERCC2P18074 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC2P18074 GUSBP6-202ENST00000438529 1198 ntBASIC20.86■□□□□ 0.93
ERCC2P18074 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.86■□□□□ 0.93
ERCC2P18074 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.86■□□□□ 0.93
ERCC2P18074 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.86■□□□□ 0.93
ERCC2P18074 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
ERCC2P18074 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.86■□□□□ 0.93
ERCC2P18074 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.86■□□□□ 0.93
ERCC2P18074 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.86■□□□□ 0.93
ERCC2P18074 AL162377.1-201ENST00000618844 1793 ntBASIC20.86■□□□□ 0.93
ERCC2P18074 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC2P18074 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC2P18074 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.86■□□□□ 0.93
ERCC2P18074 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC2P18074 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ERCC2P18074 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC2P18074 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ERCC2P18074 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
ERCC2P18074 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.86■□□□□ 0.93
ERCC2P18074 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC2P18074 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC2P18074 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC2P18074 SMG8-203ENST00000578922 2178 ntBASIC20.85■□□□□ 0.93
ERCC2P18074 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC2P18074 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.85■□□□□ 0.93
ERCC2P18074 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC2P18074 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ERCC2P18074 BX276092.2-201ENST00000417668 665 ntBASIC20.85■□□□□ 0.93
ERCC2P18074 DPP3P2-201ENST00000416030 1696 ntBASIC20.85■□□□□ 0.93
ERCC2P18074 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
ERCC2P18074 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC2P18074 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ERCC2P18074 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC2P18074 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ERCC2P18074 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC2P18074 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ERCC2P18074 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC2P18074 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC2P18074 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC2P18074 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC2P18074 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC2P18074 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC2P18074 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC2P18074 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC2P18074 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.84■□□□□ 0.93
ERCC2P18074 LSM12P1-201ENST00000411836 588 ntBASIC20.84■□□□□ 0.93
ERCC2P18074 MIPEPP3-201ENST00000412105 444 ntBASIC20.84■□□□□ 0.93
ERCC2P18074 TSPY6P-201ENST00000448518 926 ntBASIC20.84■□□□□ 0.93
ERCC2P18074 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.84■□□□□ 0.93
ERCC2P18074 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
ERCC2P18074 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms