Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP3CBP16298 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP3CBP16298 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PPP3CBP16298 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.11■□□□□ 0.49
PPP3CBP16298 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PPP3CBP16298 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.11■□□□□ 0.49
PPP3CBP16298 AC091874.3-201ENST00000512672 1195 ntBASIC18.11■□□□□ 0.49
PPP3CBP16298 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP3CBP16298 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP3CBP16298 MYC-209ENST00000641252 345 ntBASIC18.11■□□□□ 0.49
PPP3CBP16298 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP3CBP16298 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP3CBP16298 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PPP3CBP16298 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.11■□□□□ 0.49
PPP3CBP16298 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP3CBP16298 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP3CBP16298 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.11■□□□□ 0.49
PPP3CBP16298 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.11■□□□□ 0.49
PPP3CBP16298 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP3CBP16298 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PPP3CBP16298 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PPP3CBP16298 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP3CBP16298 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP3CBP16298 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP3CBP16298 Z98882.1-201ENST00000622160 2253 ntBASIC18.1■□□□□ 0.49
PPP3CBP16298 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PPP3CBP16298 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PPP3CBP16298 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PPP3CBP16298 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP3CBP16298 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP3CBP16298 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PPP3CBP16298 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PPP3CBP16298 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.1■□□□□ 0.49
PPP3CBP16298 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.1■□□□□ 0.49
PPP3CBP16298 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP3CBP16298 AC007322.3-201ENST00000426526 701 ntBASIC18.1■□□□□ 0.49
PPP3CBP16298 RNA5SP413-201ENST00000516373 109 ntBASIC18.1■□□□□ 0.49
PPP3CBP16298 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.1■□□□□ 0.49
PPP3CBP16298 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.1■□□□□ 0.49
PPP3CBP16298 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.1■□□□□ 0.49
PPP3CBP16298 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.1■□□□□ 0.49
PPP3CBP16298 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP3CBP16298 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP3CBP16298 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP3CBP16298 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.09■□□□□ 0.49
PPP3CBP16298 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PPP3CBP16298 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PPP3CBP16298 MCRIP2P1-201ENST00000394346 511 ntBASIC18.09■□□□□ 0.49
PPP3CBP16298 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PPP3CBP16298 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.09■□□□□ 0.49
PPP3CBP16298 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.09■□□□□ 0.49
PPP3CBP16298 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.09■□□□□ 0.49
PPP3CBP16298 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.09■□□□□ 0.49
PPP3CBP16298 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.09■□□□□ 0.49
PPP3CBP16298 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP3CBP16298 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PPP3CBP16298 FEM1AP4-201ENST00000443167 1987 ntBASIC18.08■□□□□ 0.49
PPP3CBP16298 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PPP3CBP16298 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PPP3CBP16298 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PPP3CBP16298 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PPP3CBP16298 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PPP3CBP16298 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PPP3CBP16298 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.08■□□□□ 0.48
PPP3CBP16298 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.08■□□□□ 0.48
PPP3CBP16298 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.08■□□□□ 0.48
PPP3CBP16298 DUSP5P2-201ENST00000426873 1033 ntBASIC18.08■□□□□ 0.48
PPP3CBP16298 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PPP3CBP16298 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.08■□□□□ 0.48
PPP3CBP16298 CYP2T3P-201ENST00000601990 817 ntBASIC18.08■□□□□ 0.48
PPP3CBP16298 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PPP3CBP16298 AL589743.5-201ENST00000616611 1050 ntBASIC18.08■□□□□ 0.48
PPP3CBP16298 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PPP3CBP16298 LINC01006-201ENST00000333319 2292 ntBASIC18.08■□□□□ 0.48
PPP3CBP16298 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PPP3CBP16298 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PPP3CBP16298 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PPP3CBP16298 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PPP3CBP16298 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PPP3CBP16298 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
PPP3CBP16298 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PPP3CBP16298 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPP3CBP16298 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPP3CBP16298 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PPP3CBP16298 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PPP3CBP16298 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms