Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 MIR718-201ENST00000390190 70 ntBASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
RAB40ALP0C0E4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 AC026310.3-201ENST00000625186 2373 ntBASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 AL596275.1-201ENST00000423464 877 ntBASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 AC233263.1-201ENST00000578059 224 ntBASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RAB40ALP0C0E4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 AL390719.1-204ENST00000412397 1219 ntBASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 AC120498.8-201ENST00000614275 531 ntBASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40ALP0C0E4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.09■□□□□ 0.65
RAB40ALP0C0E4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms