Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 IKBKGP1-201ENST00000612193 1073 ntBASIC20.29■□□□□ 0.84
APOA4P06727 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
APOA4P06727 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
APOA4P06727 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APOA4P06727 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APOA4P06727 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APOA4P06727 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APOA4P06727 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
APOA4P06727 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
APOA4P06727 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APOA4P06727 AL391422.3-201ENST00000603791 2761 ntBASIC20.29■□□□□ 0.84
APOA4P06727 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
APOA4P06727 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
APOA4P06727 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.28■□□□□ 0.84
APOA4P06727 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APOA4P06727 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APOA4P06727 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.28■□□□□ 0.84
APOA4P06727 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APOA4P06727 AC099778.1-201ENST00000568593 1911 ntBASIC20.28■□□□□ 0.84
APOA4P06727 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.28■□□□□ 0.84
APOA4P06727 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APOA4P06727 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APOA4P06727 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APOA4P06727 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.28■□□□□ 0.84
APOA4P06727 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.28■□□□□ 0.84
APOA4P06727 DUX4L16-201ENST00000555130 1264 ntBASIC20.28■□□□□ 0.84
APOA4P06727 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.28■□□□□ 0.84
APOA4P06727 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.28■□□□□ 0.84
APOA4P06727 AC092437.1-201ENST00000624794 1048 ntBASIC20.28■□□□□ 0.84
APOA4P06727 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.28■□□□□ 0.84
APOA4P06727 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
APOA4P06727 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
APOA4P06727 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.28■□□□□ 0.84
APOA4P06727 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APOA4P06727 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APOA4P06727 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.28■□□□□ 0.84
APOA4P06727 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.28■□□□□ 0.84
APOA4P06727 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
APOA4P06727 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
APOA4P06727 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
APOA4P06727 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APOA4P06727 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APOA4P06727 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
APOA4P06727 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
APOA4P06727 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APOA4P06727 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
APOA4P06727 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APOA4P06727 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APOA4P06727 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
APOA4P06727 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
APOA4P06727 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APOA4P06727 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.27■□□□□ 0.84
APOA4P06727 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.27■□□□□ 0.84
APOA4P06727 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APOA4P06727 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
APOA4P06727 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.27■□□□□ 0.84
APOA4P06727 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.27■□□□□ 0.84
APOA4P06727 AC007322.3-201ENST00000426526 701 ntBASIC20.27■□□□□ 0.84
APOA4P06727 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.27■□□□□ 0.84
APOA4P06727 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APOA4P06727 AL591742.1-201ENST00000604433 565 ntBASIC20.27■□□□□ 0.84
APOA4P06727 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.27■□□□□ 0.84
APOA4P06727 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
APOA4P06727 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APOA4P06727 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
APOA4P06727 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
APOA4P06727 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
APOA4P06727 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.26■□□□□ 0.83
APOA4P06727 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APOA4P06727 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
APOA4P06727 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.26■□□□□ 0.83
APOA4P06727 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.26■□□□□ 0.83
APOA4P06727 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
APOA4P06727 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.26■□□□□ 0.83
APOA4P06727 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APOA4P06727 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
APOA4P06727 AC007322.4-201ENST00000509611 723 ntBASIC20.26■□□□□ 0.83
APOA4P06727 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.26■□□□□ 0.83
APOA4P06727 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.26■□□□□ 0.83
APOA4P06727 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
APOA4P06727 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
APOA4P06727 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
APOA4P06727 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
APOA4P06727 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
APOA4P06727 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APOA4P06727 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
APOA4P06727 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.25■□□□□ 0.83
APOA4P06727 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.25■□□□□ 0.83
APOA4P06727 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.25■□□□□ 0.83
APOA4P06727 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APOA4P06727 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
APOA4P06727 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
APOA4P06727 AC004911.1-201ENST00000416316 871 ntBASIC20.25■□□□□ 0.83
APOA4P06727 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.25■□□□□ 0.83
APOA4P06727 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.25■□□□□ 0.83
APOA4P06727 AC231657.2-201ENST00000624556 255 ntBASIC20.25■□□□□ 0.83
APOA4P06727 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APOA4P06727 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
APOA4P06727 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APOA4P06727 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms