Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL5A2P05997 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC26.94■■□□□ 1.9
COL5A2P05997 AC010947.1-201ENST00000623454 693 ntBASIC26.94■■□□□ 1.9
COL5A2P05997 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL5A2P05997 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
COL5A2P05997 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.94■■□□□ 1.9
COL5A2P05997 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
COL5A2P05997 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
COL5A2P05997 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.94■■□□□ 1.9
COL5A2P05997 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL5A2P05997 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL5A2P05997 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
COL5A2P05997 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC26.93■■□□□ 1.9
COL5A2P05997 CRAT-202ENST00000393384 973 ntTSL 2 BASIC26.93■■□□□ 1.9
COL5A2P05997 SLC25A3P1-201ENST00000443844 931 ntBASIC26.93■■□□□ 1.9
COL5A2P05997 FITM1-202ENST00000559294 800 ntBASIC26.93■■□□□ 1.9
COL5A2P05997 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL5A2P05997 C9orf163-202ENST00000624034 2573 ntBASIC26.93■■□□□ 1.9
COL5A2P05997 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
COL5A2P05997 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC26.92■■□□□ 1.9
COL5A2P05997 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
COL5A2P05997 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL5A2P05997 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL5A2P05997 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC26.92■■□□□ 1.9
COL5A2P05997 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL5A2P05997 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC26.92■■□□□ 1.9
COL5A2P05997 AP002982.1-201ENST00000492365 877 ntBASIC26.92■■□□□ 1.9
COL5A2P05997 AC116562.2-201ENST00000507042 360 ntBASIC26.92■■□□□ 1.9
COL5A2P05997 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC26.92■■□□□ 1.9
COL5A2P05997 PNN-205ENST00000556530 601 ntTSL 2 BASIC26.92■■□□□ 1.9
COL5A2P05997 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC26.92■■□□□ 1.9
COL5A2P05997 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
COL5A2P05997 NIFKP9-201ENST00000419265 221 ntBASIC26.91■■□□□ 1.9
COL5A2P05997 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
COL5A2P05997 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
COL5A2P05997 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL5A2P05997 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC26.91■■□□□ 1.9
COL5A2P05997 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
COL5A2P05997 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL5A2P05997 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC26.91■■□□□ 1.9
COL5A2P05997 GOLGA2P6-201ENST00000340929 2049 ntBASIC26.91■■□□□ 1.9
COL5A2P05997 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC26.91■■□□□ 1.9
COL5A2P05997 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
COL5A2P05997 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL5A2P05997 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC26.9■■□□□ 1.9
COL5A2P05997 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
COL5A2P05997 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
COL5A2P05997 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.9■■□□□ 1.9
COL5A2P05997 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
COL5A2P05997 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
COL5A2P05997 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC26.9■■□□□ 1.9
COL5A2P05997 NAPSB-206ENST00000562112 1266 ntBASIC26.9■■□□□ 1.9
COL5A2P05997 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
COL5A2P05997 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
COL5A2P05997 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.9■■□□□ 1.9
COL5A2P05997 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
COL5A2P05997 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
COL5A2P05997 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
COL5A2P05997 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
COL5A2P05997 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
COL5A2P05997 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC26.89■■□□□ 1.9
COL5A2P05997 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC26.89■■□□□ 1.9
COL5A2P05997 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.89■■□□□ 1.9
COL5A2P05997 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC26.89■■□□□ 1.9
COL5A2P05997 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
COL5A2P05997 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC26.88■■□□□ 1.89
COL5A2P05997 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL5A2P05997 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
COL5A2P05997 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC26.88■■□□□ 1.89
COL5A2P05997 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC26.88■■□□□ 1.89
COL5A2P05997 AC004264.1-201ENST00000608354 794 ntBASIC26.88■■□□□ 1.89
COL5A2P05997 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
COL5A2P05997 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
COL5A2P05997 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL5A2P05997 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
COL5A2P05997 DUX4L26-201ENST00000489078 1255 ntBASIC26.87■■□□□ 1.89
COL5A2P05997 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC26.87■■□□□ 1.89
COL5A2P05997 CFL2-205ENST00000555765 632 ntTSL 2 BASIC26.87■■□□□ 1.89
COL5A2P05997 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC26.87■■□□□ 1.89
COL5A2P05997 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
COL5A2P05997 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.87■■□□□ 1.89
COL5A2P05997 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
COL5A2P05997 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
COL5A2P05997 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL5A2P05997 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL5A2P05997 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL5A2P05997 KRT8P36-201ENST00000489121 1440 ntBASIC26.87■■□□□ 1.89
COL5A2P05997 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.87■■□□□ 1.89
COL5A2P05997 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL5A2P05997 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC26.87■■□□□ 1.89
COL5A2P05997 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
COL5A2P05997 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
COL5A2P05997 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
COL5A2P05997 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC26.87■■□□□ 1.89
COL5A2P05997 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
COL5A2P05997 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL5A2P05997 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
COL5A2P05997 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL5A2P05997 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.86■■□□□ 1.89
COL5A2P05997 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms