Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CHGBP05060 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHGBP05060 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHGBP05060 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHGBP05060 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHGBP05060 LINC01006-201ENST00000333319 2292 ntBASIC24.44■■□□□ 1.5
CHGBP05060 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHGBP05060 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHGBP05060 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHGBP05060 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24.43■■□□□ 1.5
CHGBP05060 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CHGBP05060 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CHGBP05060 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
CHGBP05060 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHGBP05060 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHGBP05060 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.43■■□□□ 1.5
CHGBP05060 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHGBP05060 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.43■■□□□ 1.5
CHGBP05060 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24.43■■□□□ 1.5
CHGBP05060 TSPY20P-201ENST00000450910 630 ntBASIC24.43■■□□□ 1.5
CHGBP05060 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHGBP05060 AL391422.3-201ENST00000603791 2761 ntBASIC24.43■■□□□ 1.5
CHGBP05060 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHGBP05060 SMG8-203ENST00000578922 2178 ntBASIC24.43■■□□□ 1.5
CHGBP05060 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CHGBP05060 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHGBP05060 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHGBP05060 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
CHGBP05060 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CHGBP05060 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC24.42■■□□□ 1.5
CHGBP05060 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.42■■□□□ 1.5
CHGBP05060 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
CHGBP05060 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHGBP05060 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CHGBP05060 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC24.42■■□□□ 1.5
CHGBP05060 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC24.42■■□□□ 1.5
CHGBP05060 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.42■■□□□ 1.5
CHGBP05060 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CHGBP05060 SERP1-205ENST00000487153 657 ntTSL 4 BASIC24.42■■□□□ 1.5
CHGBP05060 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
CHGBP05060 INO80E-214ENST00000620599 515 ntTSL 2 BASIC24.42■■□□□ 1.5
CHGBP05060 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.42■■□□□ 1.5
CHGBP05060 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CHGBP05060 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHGBP05060 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHGBP05060 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHGBP05060 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHGBP05060 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC24.42■■□□□ 1.5
CHGBP05060 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC24.41■■□□□ 1.5
CHGBP05060 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC24.41■■□□□ 1.5
CHGBP05060 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.41■■□□□ 1.5
CHGBP05060 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHGBP05060 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHGBP05060 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
CHGBP05060 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHGBP05060 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHGBP05060 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CHGBP05060 SLC29A4P2-201ENST00000504749 1089 ntBASIC24.41■■□□□ 1.5
CHGBP05060 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHGBP05060 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
CHGBP05060 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.41■■□□□ 1.5
CHGBP05060 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC24.41■■□□□ 1.5
CHGBP05060 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.41■■□□□ 1.5
CHGBP05060 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.41■■□□□ 1.5
CHGBP05060 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CHGBP05060 PTBP1P-201ENST00000554374 1601 ntBASIC24.41■■□□□ 1.5
CHGBP05060 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CHGBP05060 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CHGBP05060 AP005212.1-201ENST00000581547 1997 ntBASIC24.41■■□□□ 1.5
CHGBP05060 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHGBP05060 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHGBP05060 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHGBP05060 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.4■■□□□ 1.5
CHGBP05060 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHGBP05060 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.4■■□□□ 1.5
CHGBP05060 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHGBP05060 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHGBP05060 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC24.4■■□□□ 1.5
CHGBP05060 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHGBP05060 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHGBP05060 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHGBP05060 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.4■■□□□ 1.5
CHGBP05060 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHGBP05060 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHGBP05060 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHGBP05060 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.4■■□□□ 1.5
CHGBP05060 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
CHGBP05060 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC24.39■■□□□ 1.5
CHGBP05060 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CHGBP05060 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CHGBP05060 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC24.39■■□□□ 1.5
CHGBP05060 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.39■■□□□ 1.5
CHGBP05060 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.39■■□□□ 1.5
CHGBP05060 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.39■■□□□ 1.49
CHGBP05060 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.39■■□□□ 1.49
CHGBP05060 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.39■■□□□ 1.49
CHGBP05060 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.49
CHGBP05060 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
CHGBP05060 AL512408.1-201ENST00000569378 2000 ntBASIC24.39■■□□□ 1.49
CHGBP05060 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms