Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.39■□□□□ 0.05
TCRAP04437 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.39■□□□□ 0.05
TCRAP04437 AP000974.1-201ENST00000623909 2387 ntBASIC15.39■□□□□ 0.05
TCRAP04437 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 AIRN-201ENST00000601203 4374 ntBASIC15.39■□□□□ 0.05
TCRAP04437 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.39■□□□□ 0.05
TCRAP04437 RARRES2P11-201ENST00000635158 484 ntBASIC15.39■□□□□ 0.05
TCRAP04437 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.39■□□□□ 0.05
TCRAP04437 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TCRAP04437 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.39■□□□□ 0.05
TCRAP04437 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TCRAP04437 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.38■□□□□ 0.05
TCRAP04437 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
TCRAP04437 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.38■□□□□ 0.05
TCRAP04437 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 UNC93B3-201ENST00000308076 687 ntBASIC15.38■□□□□ 0.05
TCRAP04437 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.38■□□□□ 0.05
TCRAP04437 AC245052.3-201ENST00000450182 901 ntBASIC15.38■□□□□ 0.05
TCRAP04437 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.38■□□□□ 0.05
TCRAP04437 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.38■□□□□ 0.05
TCRAP04437 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.38■□□□□ 0.05
TCRAP04437 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 TMEM179-206ENST00000616017 1645 ntBASIC15.38■□□□□ 0.05
TCRAP04437 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 TSPY26P-201ENST00000476365 1326 ntBASIC15.38■□□□□ 0.05
TCRAP04437 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.38■□□□□ 0.05
TCRAP04437 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TCRAP04437 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRAP04437 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TCRAP04437 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TCRAP04437 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.37■□□□□ 0.05
TCRAP04437 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRAP04437 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
TCRAP04437 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRAP04437 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRAP04437 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TCRAP04437 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRAP04437 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TCRAP04437 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.37■□□□□ 0.05
TCRAP04437 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.37■□□□□ 0.05
TCRAP04437 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRAP04437 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TCRAP04437 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRAP04437 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.37■□□□□ 0.05
TCRAP04437 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRAP04437 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
TCRAP04437 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRAP04437 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRAP04437 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRAP04437 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.36■□□□□ 0.05
TCRAP04437 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.36■□□□□ 0.05
TCRAP04437 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.36■□□□□ 0.05
TCRAP04437 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TCRAP04437 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.36■□□□□ 0.05
TCRAP04437 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.36■□□□□ 0.05
TCRAP04437 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.36■□□□□ 0.05
TCRAP04437 AC024257.2-201ENST00000549699 147 ntBASIC15.36■□□□□ 0.05
TCRAP04437 AC008764.7-201ENST00000593779 1081 ntBASIC15.36■□□□□ 0.05
TCRAP04437 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 AC116050.2-201ENST00000612102 1779 ntBASIC15.36■□□□□ 0.05
TCRAP04437 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 TNXA-203ENST00000507684 2038 ntBASIC15.36■□□□□ 0.05
TCRAP04437 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRAP04437 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms