Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LMNAP02545 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.09■□□□□ 0.97
LMNAP02545 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.09■□□□□ 0.97
LMNAP02545 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.09■□□□□ 0.97
LMNAP02545 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.09■□□□□ 0.97
LMNAP02545 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
LMNAP02545 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.09■□□□□ 0.97
LMNAP02545 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LMNAP02545 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
LMNAP02545 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LMNAP02545 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
LMNAP02545 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LMNAP02545 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.09■□□□□ 0.97
LMNAP02545 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LMNAP02545 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LMNAP02545 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LMNAP02545 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LMNAP02545 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
LMNAP02545 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LMNAP02545 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.08■□□□□ 0.97
LMNAP02545 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.08■□□□□ 0.97
LMNAP02545 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LMNAP02545 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.08■□□□□ 0.97
LMNAP02545 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
LMNAP02545 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
LMNAP02545 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LMNAP02545 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LMNAP02545 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LMNAP02545 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LMNAP02545 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LMNAP02545 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LMNAP02545 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.07■□□□□ 0.96
LMNAP02545 RCN1P1-201ENST00000400413 996 ntBASIC21.07■□□□□ 0.96
LMNAP02545 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.07■□□□□ 0.96
LMNAP02545 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LMNAP02545 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LMNAP02545 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.07■□□□□ 0.96
LMNAP02545 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LMNAP02545 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.07■□□□□ 0.96
LMNAP02545 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.07■□□□□ 0.96
LMNAP02545 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.07■□□□□ 0.96
LMNAP02545 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.07■□□□□ 0.96
LMNAP02545 AL353803.4-201ENST00000565882 1934 ntBASIC21.07■□□□□ 0.96
LMNAP02545 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LMNAP02545 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LMNAP02545 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LMNAP02545 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
LMNAP02545 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LMNAP02545 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LMNAP02545 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
LMNAP02545 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LMNAP02545 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMNAP02545 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LMNAP02545 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LMNAP02545 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.06■□□□□ 0.96
LMNAP02545 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LMNAP02545 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMNAP02545 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMNAP02545 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LMNAP02545 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LMNAP02545 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.06■□□□□ 0.96
LMNAP02545 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.06■□□□□ 0.96
LMNAP02545 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMNAP02545 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMNAP02545 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.06■□□□□ 0.96
LMNAP02545 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMNAP02545 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMNAP02545 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMNAP02545 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.05■□□□□ 0.96
LMNAP02545 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
LMNAP02545 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMNAP02545 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LMNAP02545 AC012618.2-201ENST00000428058 849 ntBASIC21.05■□□□□ 0.96
LMNAP02545 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.05■□□□□ 0.96
LMNAP02545 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.05■□□□□ 0.96
LMNAP02545 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LMNAP02545 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
LMNAP02545 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LMNAP02545 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.05■□□□□ 0.96
LMNAP02545 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.05■□□□□ 0.96
LMNAP02545 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMNAP02545 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LMNAP02545 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMNAP02545 ARMC10P1-201ENST00000313754 855 ntBASIC21.04■□□□□ 0.96
LMNAP02545 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LMNAP02545 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.04■□□□□ 0.96
LMNAP02545 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.04■□□□□ 0.96
LMNAP02545 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.04■□□□□ 0.96
LMNAP02545 AC008175.2-201ENST00000612840 297 ntBASIC21.04■□□□□ 0.96
LMNAP02545 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.04■□□□□ 0.96
LMNAP02545 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMNAP02545 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMNAP02545 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMNAP02545 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LMNAP02545 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMNAP02545 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LMNAP02545 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMNAP02545 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.04■□□□□ 0.96
LMNAP02545 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.04■□□□□ 0.96
LMNAP02545 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms