Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBC1P01850 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.32■□□□□ 0.84
TRBC1P01850 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.32■□□□□ 0.84
TRBC1P01850 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.32■□□□□ 0.84
TRBC1P01850 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.32■□□□□ 0.84
TRBC1P01850 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRBC1P01850 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.32■□□□□ 0.84
TRBC1P01850 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBC1P01850 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBC1P01850 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBC1P01850 AC092720.2-201ENST00000602388 1665 ntBASIC20.32■□□□□ 0.84
TRBC1P01850 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRBC1P01850 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRBC1P01850 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.31■□□□□ 0.84
TRBC1P01850 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TRBC1P01850 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBC1P01850 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.31■□□□□ 0.84
TRBC1P01850 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.31■□□□□ 0.84
TRBC1P01850 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBC1P01850 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.31■□□□□ 0.84
TRBC1P01850 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.31■□□□□ 0.84
TRBC1P01850 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRBC1P01850 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBC1P01850 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRBC1P01850 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBC1P01850 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRBC1P01850 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBC1P01850 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.31■□□□□ 0.84
TRBC1P01850 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBC1P01850 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBC1P01850 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.3■□□□□ 0.84
TRBC1P01850 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBC1P01850 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBC1P01850 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.3■□□□□ 0.84
TRBC1P01850 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBC1P01850 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.3■□□□□ 0.84
TRBC1P01850 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.3■□□□□ 0.84
TRBC1P01850 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TRBC1P01850 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.3■□□□□ 0.84
TRBC1P01850 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.3■□□□□ 0.84
TRBC1P01850 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBC1P01850 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.3■□□□□ 0.84
TRBC1P01850 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBC1P01850 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TRBC1P01850 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBC1P01850 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TRBC1P01850 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TRBC1P01850 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
TRBC1P01850 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRBC1P01850 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.29■□□□□ 0.84
TRBC1P01850 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRBC1P01850 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.29■□□□□ 0.84
TRBC1P01850 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.29■□□□□ 0.84
TRBC1P01850 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBC1P01850 AC073314.1-201ENST00000568729 2216 ntBASIC20.29■□□□□ 0.84
TRBC1P01850 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBC1P01850 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBC1P01850 FEM1AP1-201ENST00000431297 1995 ntBASIC20.28■□□□□ 0.84
TRBC1P01850 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRBC1P01850 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.28■□□□□ 0.84
TRBC1P01850 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRBC1P01850 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.28■□□□□ 0.84
TRBC1P01850 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBC1P01850 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.28■□□□□ 0.84
TRBC1P01850 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRBC1P01850 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRBC1P01850 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBC1P01850 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBC1P01850 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBC1P01850 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRBC1P01850 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBC1P01850 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBC1P01850 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TRBC1P01850 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
TRBC1P01850 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBC1P01850 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
TRBC1P01850 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBC1P01850 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRBC1P01850 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBC1P01850 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TRBC1P01850 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBC1P01850 AP005212.1-201ENST00000581547 1997 ntBASIC20.27■□□□□ 0.84
TRBC1P01850 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.27■□□□□ 0.84
TRBC1P01850 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRBC1P01850 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.27■□□□□ 0.84
TRBC1P01850 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms