Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
ALDH1A1P00352 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.32■■□□□ 1.32
ALDH1A1P00352 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ALDH1A1P00352 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
ALDH1A1P00352 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
ALDH1A1P00352 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.32■■□□□ 1.32
ALDH1A1P00352 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ALDH1A1P00352 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ALDH1A1P00352 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.32■■□□□ 1.32
ALDH1A1P00352 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.32■■□□□ 1.32
ALDH1A1P00352 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ALDH1A1P00352 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ALDH1A1P00352 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
ALDH1A1P00352 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ALDH1A1P00352 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ALDH1A1P00352 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ALDH1A1P00352 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
ALDH1A1P00352 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
ALDH1A1P00352 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ALDH1A1P00352 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.31■■□□□ 1.32
ALDH1A1P00352 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.31■■□□□ 1.32
ALDH1A1P00352 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.31■■□□□ 1.32
ALDH1A1P00352 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.31■■□□□ 1.32
ALDH1A1P00352 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
ALDH1A1P00352 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC23.31■■□□□ 1.32
ALDH1A1P00352 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.31■■□□□ 1.32
ALDH1A1P00352 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ALDH1A1P00352 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ALDH1A1P00352 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ALDH1A1P00352 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ALDH1A1P00352 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ALDH1A1P00352 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.31■■□□□ 1.32
ALDH1A1P00352 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ALDH1A1P00352 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ALDH1A1P00352 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ALDH1A1P00352 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
ALDH1A1P00352 AC027702.1-201ENST00000563810 1770 ntBASIC23.3■■□□□ 1.32
ALDH1A1P00352 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
ALDH1A1P00352 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ALDH1A1P00352 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.3■■□□□ 1.32
ALDH1A1P00352 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.3■■□□□ 1.32
ALDH1A1P00352 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ALDH1A1P00352 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ALDH1A1P00352 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ALDH1A1P00352 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
ALDH1A1P00352 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.3■■□□□ 1.32
ALDH1A1P00352 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.3■■□□□ 1.32
ALDH1A1P00352 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
ALDH1A1P00352 FAM99A-202ENST00000538190 1989 ntBASIC23.3■■□□□ 1.32
ALDH1A1P00352 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.3■■□□□ 1.32
ALDH1A1P00352 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ALDH1A1P00352 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.3■■□□□ 1.32
ALDH1A1P00352 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ALDH1A1P00352 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ALDH1A1P00352 TPM4P1-201ENST00000436100 807 ntBASIC23.29■■□□□ 1.32
ALDH1A1P00352 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.29■■□□□ 1.32
ALDH1A1P00352 EGLN1P1-201ENST00000531623 762 ntBASIC23.29■■□□□ 1.32
ALDH1A1P00352 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ALDH1A1P00352 AL358472.4-201ENST00000633140 710 ntBASIC23.29■■□□□ 1.32
ALDH1A1P00352 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.29■■□□□ 1.32
ALDH1A1P00352 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ALDH1A1P00352 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
ALDH1A1P00352 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ALDH1A1P00352 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.28■■□□□ 1.32
ALDH1A1P00352 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
ALDH1A1P00352 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ALDH1A1P00352 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.28■■□□□ 1.32
ALDH1A1P00352 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC23.28■■□□□ 1.32
ALDH1A1P00352 BX664615.1-201ENST00000443558 458 ntBASIC23.28■■□□□ 1.32
ALDH1A1P00352 KRT126P-201ENST00000549467 1181 ntBASIC23.28■■□□□ 1.32
ALDH1A1P00352 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ALDH1A1P00352 METTL23-204ENST00000586752 904 ntTSL 2 BASIC23.28■■□□□ 1.32
ALDH1A1P00352 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ALDH1A1P00352 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ALDH1A1P00352 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
ALDH1A1P00352 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 GUK1-204ENST00000366721 689 ntTSL 3 BASIC23.27■■□□□ 1.32
ALDH1A1P00352 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 AK4P3-201ENST00000418260 669 ntBASIC23.27■■□□□ 1.32
ALDH1A1P00352 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.27■■□□□ 1.32
ALDH1A1P00352 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 AC022616.7-201ENST00000525383 220 ntBASIC23.27■■□□□ 1.32
ALDH1A1P00352 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.27■■□□□ 1.32
ALDH1A1P00352 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.27■■□□□ 1.32
ALDH1A1P00352 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.27■■□□□ 1.32
ALDH1A1P00352 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ALDH1A1P00352 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
ALDH1A1P00352 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
ALDH1A1P00352 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms