Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP3BO95985 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP3BO95985 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TOP3BO95985 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP3BO95985 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TOP3BO95985 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TOP3BO95985 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TOP3BO95985 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.71■□□□□ 0.91
TOP3BO95985 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.71■□□□□ 0.91
TOP3BO95985 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP3BO95985 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TOP3BO95985 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TOP3BO95985 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP3BO95985 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP3BO95985 FAM210CP-201ENST00000445714 574 ntBASIC20.71■□□□□ 0.91
TOP3BO95985 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.71■□□□□ 0.91
TOP3BO95985 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.71■□□□□ 0.91
TOP3BO95985 MYC-209ENST00000641252 345 ntBASIC20.71■□□□□ 0.91
TOP3BO95985 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TOP3BO95985 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TOP3BO95985 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TOP3BO95985 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
TOP3BO95985 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TOP3BO95985 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP3BO95985 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TOP3BO95985 AC121338.2-201ENST00000622535 1744 ntBASIC20.7■□□□□ 0.9
TOP3BO95985 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
TOP3BO95985 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TOP3BO95985 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TOP3BO95985 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TOP3BO95985 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP3BO95985 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP3BO95985 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP3BO95985 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TOP3BO95985 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.7■□□□□ 0.9
TOP3BO95985 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP3BO95985 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP3BO95985 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP3BO95985 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TOP3BO95985 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TOP3BO95985 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TOP3BO95985 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.7■□□□□ 0.9
TOP3BO95985 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP3BO95985 AC112907.3-201ENST00000577781 2400 ntBASIC20.69■□□□□ 0.9
TOP3BO95985 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.69■□□□□ 0.9
TOP3BO95985 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP3BO95985 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.69■□□□□ 0.9
TOP3BO95985 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP3BO95985 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TOP3BO95985 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.69■□□□□ 0.9
TOP3BO95985 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.69■□□□□ 0.9
TOP3BO95985 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.69■□□□□ 0.9
TOP3BO95985 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TOP3BO95985 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP3BO95985 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP3BO95985 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP3BO95985 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.69■□□□□ 0.9
TOP3BO95985 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TOP3BO95985 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TOP3BO95985 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.69■□□□□ 0.9
TOP3BO95985 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TOP3BO95985 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TOP3BO95985 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP3BO95985 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TOP3BO95985 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.68■□□□□ 0.9
TOP3BO95985 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
TOP3BO95985 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP3BO95985 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.68■□□□□ 0.9
TOP3BO95985 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP3BO95985 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP3BO95985 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.68■□□□□ 0.9
TOP3BO95985 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP3BO95985 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP3BO95985 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.68■□□□□ 0.9
TOP3BO95985 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TOP3BO95985 TERF1P5-201ENST00000477545 1207 ntBASIC20.68■□□□□ 0.9
TOP3BO95985 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.68■□□□□ 0.9
TOP3BO95985 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.68■□□□□ 0.9
TOP3BO95985 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.68■□□□□ 0.9
TOP3BO95985 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.68■□□□□ 0.9
TOP3BO95985 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.68■□□□□ 0.9
TOP3BO95985 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.68■□□□□ 0.9
TOP3BO95985 AC013268.1-206ENST00000638368 961 ntBASIC20.68■□□□□ 0.9
TOP3BO95985 AC112229.1-201ENST00000639295 961 ntBASIC20.68■□□□□ 0.9
TOP3BO95985 AC073648.6-201ENST00000641589 218 ntBASIC20.68■□□□□ 0.9
TOP3BO95985 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP3BO95985 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP3BO95985 AC009237.3-201ENST00000393279 1427 ntBASIC20.68■□□□□ 0.9
TOP3BO95985 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TOP3BO95985 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP3BO95985 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TOP3BO95985 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
TOP3BO95985 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TOP3BO95985 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TOP3BO95985 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TOP3BO95985 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TOP3BO95985 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TOP3BO95985 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TOP3BO95985 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TOP3BO95985 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms