Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFT2D2O95562 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFT2D2O95562 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SFT2D2O95562 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SFT2D2O95562 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SFT2D2O95562 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SFT2D2O95562 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFT2D2O95562 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SFT2D2O95562 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SFT2D2O95562 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.78■□□□□ 0.28
SFT2D2O95562 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
SFT2D2O95562 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SFT2D2O95562 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.78■□□□□ 0.28
SFT2D2O95562 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFT2D2O95562 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.78■□□□□ 0.28
SFT2D2O95562 MIR3621-201ENST00000580529 85 ntBASIC16.78■□□□□ 0.28
SFT2D2O95562 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.78■□□□□ 0.28
SFT2D2O95562 AC011298.3-201ENST00000615796 283 ntBASIC16.78■□□□□ 0.28
SFT2D2O95562 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
SFT2D2O95562 MIR2861-201ENST00000636310 90 ntBASIC16.78■□□□□ 0.28
SFT2D2O95562 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SFT2D2O95562 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFT2D2O95562 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SFT2D2O95562 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.78■□□□□ 0.28
SFT2D2O95562 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFT2D2O95562 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.78■□□□□ 0.28
SFT2D2O95562 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFT2D2O95562 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFT2D2O95562 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SFT2D2O95562 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SFT2D2O95562 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SFT2D2O95562 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SFT2D2O95562 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SFT2D2O95562 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SFT2D2O95562 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SFT2D2O95562 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SFT2D2O95562 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SFT2D2O95562 AC009299.2-201ENST00000482477 511 ntBASIC16.77■□□□□ 0.28
SFT2D2O95562 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.77■□□□□ 0.28
SFT2D2O95562 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SFT2D2O95562 DUX4L19-201ENST00000557448 1267 ntBASIC16.77■□□□□ 0.28
SFT2D2O95562 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.77■□□□□ 0.28
SFT2D2O95562 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SFT2D2O95562 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SFT2D2O95562 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SFT2D2O95562 AC005224.4-201ENST00000583262 1652 ntBASIC16.77■□□□□ 0.28
SFT2D2O95562 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SFT2D2O95562 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SFT2D2O95562 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.77■□□□□ 0.27
SFT2D2O95562 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SFT2D2O95562 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SFT2D2O95562 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SFT2D2O95562 TREX1-205ENST00000625293 1783 ntBASIC16.77■□□□□ 0.27
SFT2D2O95562 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SFT2D2O95562 AC061975.6-201ENST00000579045 1553 ntBASIC16.77■□□□□ 0.27
SFT2D2O95562 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFT2D2O95562 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SFT2D2O95562 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
SFT2D2O95562 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFT2D2O95562 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.76■□□□□ 0.27
SFT2D2O95562 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SFT2D2O95562 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFT2D2O95562 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFT2D2O95562 AL691432.2-201ENST00000607222 2038 ntBASIC16.76■□□□□ 0.27
SFT2D2O95562 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.76■□□□□ 0.27
SFT2D2O95562 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SFT2D2O95562 AC133561.4-201ENST00000566112 224 ntBASIC16.76■□□□□ 0.27
SFT2D2O95562 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.76■□□□□ 0.27
SFT2D2O95562 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SFT2D2O95562 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SFT2D2O95562 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SFT2D2O95562 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFT2D2O95562 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFT2D2O95562 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SFT2D2O95562 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SFT2D2O95562 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.75■□□□□ 0.27
SFT2D2O95562 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.75■□□□□ 0.27
SFT2D2O95562 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SFT2D2O95562 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SFT2D2O95562 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.75■□□□□ 0.27
SFT2D2O95562 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFT2D2O95562 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFT2D2O95562 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFT2D2O95562 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFT2D2O95562 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFT2D2O95562 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SFT2D2O95562 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.75■□□□□ 0.27
SFT2D2O95562 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.75■□□□□ 0.27
SFT2D2O95562 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SFT2D2O95562 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SFT2D2O95562 AC093503.3-201ENST00000624917 2352 ntBASIC16.75■□□□□ 0.27
SFT2D2O95562 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFT2D2O95562 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.75■□□□□ 0.27
SFT2D2O95562 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFT2D2O95562 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFT2D2O95562 Z82202.1-201ENST00000623446 1880 ntBASIC16.75■□□□□ 0.27
SFT2D2O95562 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SFT2D2O95562 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.75■□□□□ 0.27
SFT2D2O95562 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SFT2D2O95562 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms