Protein–RNA interactions for Protein: O75339

CILP, Cartilage intermediate layer protein 1, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CILPO75339 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CILPO75339 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CILPO75339 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CILPO75339 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.54■■□□□ 1.04
CILPO75339 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.54■■□□□ 1.04
CILPO75339 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CILPO75339 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CILPO75339 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.54■■□□□ 1.04
CILPO75339 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.54■■□□□ 1.04
CILPO75339 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CILPO75339 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CILPO75339 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CILPO75339 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.54■■□□□ 1.04
CILPO75339 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CILPO75339 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.54■■□□□ 1.04
CILPO75339 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CILPO75339 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.54■■□□□ 1.04
CILPO75339 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CILPO75339 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CILPO75339 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.54■■□□□ 1.04
CILPO75339 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CILPO75339 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CILPO75339 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CILPO75339 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CILPO75339 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CILPO75339 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CILPO75339 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CILPO75339 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CILPO75339 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CILPO75339 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CILPO75339 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CILPO75339 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.53■■□□□ 1.04
CILPO75339 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CILPO75339 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CILPO75339 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CILPO75339 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CILPO75339 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CILPO75339 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.53■■□□□ 1.04
CILPO75339 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CILPO75339 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CILPO75339 AC092667.1-201ENST00000434301 2586 ntBASIC21.52■■□□□ 1.04
CILPO75339 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CILPO75339 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CILPO75339 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.52■■□□□ 1.04
CILPO75339 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CILPO75339 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CILPO75339 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.52■■□□□ 1.04
CILPO75339 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CILPO75339 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CILPO75339 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.52■■□□□ 1.04
CILPO75339 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CILPO75339 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.52■■□□□ 1.04
CILPO75339 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.52■■□□□ 1.04
CILPO75339 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.52■■□□□ 1.04
CILPO75339 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CILPO75339 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CILPO75339 DPP3P2-201ENST00000416030 1696 ntBASIC21.52■■□□□ 1.04
CILPO75339 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.52■■□□□ 1.04
CILPO75339 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.52■■□□□ 1.04
CILPO75339 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CILPO75339 LINC01006-201ENST00000333319 2292 ntBASIC21.52■■□□□ 1.03
CILPO75339 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
CILPO75339 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CILPO75339 PTBP1P-201ENST00000554374 1601 ntBASIC21.51■■□□□ 1.03
CILPO75339 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.51■■□□□ 1.03
CILPO75339 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CILPO75339 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.51■■□□□ 1.03
CILPO75339 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CILPO75339 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CILPO75339 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.51■■□□□ 1.03
CILPO75339 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CILPO75339 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
CILPO75339 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.51■■□□□ 1.03
CILPO75339 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.51■■□□□ 1.03
CILPO75339 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CILPO75339 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CILPO75339 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
CILPO75339 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CILPO75339 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CILPO75339 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.5■■□□□ 1.03
CILPO75339 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CILPO75339 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CILPO75339 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CILPO75339 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.5■■□□□ 1.03
CILPO75339 ABHD17AP1-201ENST00000358206 933 ntBASIC21.5■■□□□ 1.03
CILPO75339 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.5■■□□□ 1.03
CILPO75339 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.5■■□□□ 1.03
CILPO75339 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.5■■□□□ 1.03
CILPO75339 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CILPO75339 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.5■■□□□ 1.03
CILPO75339 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CILPO75339 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CILPO75339 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CILPO75339 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CILPO75339 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CILPO75339 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CILPO75339 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CILPO75339 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CILPO75339 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CILPO75339 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms