Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PFDN1O60925 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PFDN1O60925 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.18■□□□□ 0.5
PFDN1O60925 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PFDN1O60925 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PFDN1O60925 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PFDN1O60925 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PFDN1O60925 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PFDN1O60925 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PFDN1O60925 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
PFDN1O60925 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.18■□□□□ 0.5
PFDN1O60925 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PFDN1O60925 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.18■□□□□ 0.5
PFDN1O60925 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PFDN1O60925 AC008894.3-201ENST00000624324 3103 ntBASIC18.18■□□□□ 0.5
PFDN1O60925 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PFDN1O60925 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PFDN1O60925 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.17■□□□□ 0.5
PFDN1O60925 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PFDN1O60925 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PFDN1O60925 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.17■□□□□ 0.5
PFDN1O60925 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PFDN1O60925 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.17■□□□□ 0.5
PFDN1O60925 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
PFDN1O60925 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PFDN1O60925 DUX4L28-201ENST00000623687 678 ntBASIC18.17■□□□□ 0.5
PFDN1O60925 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PFDN1O60925 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PFDN1O60925 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PFDN1O60925 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
PFDN1O60925 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.17■□□□□ 0.5
PFDN1O60925 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PFDN1O60925 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PFDN1O60925 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.17■□□□□ 0.5
PFDN1O60925 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.17■□□□□ 0.5
PFDN1O60925 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PFDN1O60925 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.17■□□□□ 0.5
PFDN1O60925 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PFDN1O60925 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PFDN1O60925 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PFDN1O60925 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.16■□□□□ 0.5
PFDN1O60925 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
PFDN1O60925 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PFDN1O60925 TCF3P1-201ENST00000423021 1937 ntBASIC18.16■□□□□ 0.5
PFDN1O60925 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.16■□□□□ 0.5
PFDN1O60925 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PFDN1O60925 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.16■□□□□ 0.5
PFDN1O60925 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PFDN1O60925 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PFDN1O60925 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.16■□□□□ 0.5
PFDN1O60925 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PFDN1O60925 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PFDN1O60925 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PFDN1O60925 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PFDN1O60925 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PFDN1O60925 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PFDN1O60925 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PFDN1O60925 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.16■□□□□ 0.5
PFDN1O60925 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.16■□□□□ 0.5
PFDN1O60925 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.15■□□□□ 0.5
PFDN1O60925 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PFDN1O60925 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PFDN1O60925 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.15■□□□□ 0.5
PFDN1O60925 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PFDN1O60925 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PFDN1O60925 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PFDN1O60925 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.15■□□□□ 0.5
PFDN1O60925 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PFDN1O60925 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PFDN1O60925 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PFDN1O60925 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.15■□□□□ 0.5
PFDN1O60925 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PFDN1O60925 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.15■□□□□ 0.5
PFDN1O60925 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PFDN1O60925 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.15■□□□□ 0.5
PFDN1O60925 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PFDN1O60925 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PFDN1O60925 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.15■□□□□ 0.5
PFDN1O60925 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PFDN1O60925 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PFDN1O60925 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PFDN1O60925 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.14■□□□□ 0.5
PFDN1O60925 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.14■□□□□ 0.5
PFDN1O60925 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.14■□□□□ 0.5
PFDN1O60925 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
PFDN1O60925 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PFDN1O60925 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PFDN1O60925 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PFDN1O60925 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PFDN1O60925 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PFDN1O60925 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.14■□□□□ 0.49
PFDN1O60925 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PFDN1O60925 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PFDN1O60925 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PFDN1O60925 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PFDN1O60925 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PFDN1O60925 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PFDN1O60925 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.14■□□□□ 0.49
PFDN1O60925 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
PFDN1O60925 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms