Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF13O43567 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF13O43567 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF13O43567 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF13O43567 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF13O43567 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF13O43567 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF13O43567 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RNF13O43567 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF13O43567 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
RNF13O43567 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
RNF13O43567 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RNF13O43567 AC091799.1-201ENST00000422823 811 ntBASIC18.41■□□□□ 0.54
RNF13O43567 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF13O43567 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF13O43567 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF13O43567 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF13O43567 RARRES2P6-201ENST00000567333 442 ntBASIC18.41■□□□□ 0.54
RNF13O43567 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RNF13O43567 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF13O43567 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF13O43567 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF13O43567 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF13O43567 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF13O43567 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RNF13O43567 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF13O43567 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF13O43567 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF13O43567 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF13O43567 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF13O43567 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF13O43567 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF13O43567 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF13O43567 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RNF13O43567 AC007322.3-201ENST00000426526 701 ntBASIC18.4■□□□□ 0.54
RNF13O43567 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF13O43567 AC137761.2-201ENST00000561729 223 ntBASIC18.4■□□□□ 0.54
RNF13O43567 AC145350.3-201ENST00000569033 163 ntBASIC18.4■□□□□ 0.54
RNF13O43567 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF13O43567 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RNF13O43567 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF13O43567 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RNF13O43567 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF13O43567 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF13O43567 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF13O43567 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF13O43567 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF13O43567 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF13O43567 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF13O43567 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF13O43567 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF13O43567 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF13O43567 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF13O43567 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.39■□□□□ 0.54
RNF13O43567 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF13O43567 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RNF13O43567 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF13O43567 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF13O43567 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF13O43567 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF13O43567 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF13O43567 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF13O43567 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF13O43567 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF13O43567 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF13O43567 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF13O43567 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
RNF13O43567 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF13O43567 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF13O43567 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF13O43567 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF13O43567 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF13O43567 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF13O43567 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF13O43567 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF13O43567 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF13O43567 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF13O43567 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF13O43567 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF13O43567 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF13O43567 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF13O43567 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RNF13O43567 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF13O43567 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF13O43567 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms