Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH17O14917 AC006128.1-201ENST00000624704 1661 ntBASIC19.32■□□□□ 0.68
PCDH17O14917 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH17O14917 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH17O14917 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH17O14917 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH17O14917 RNF165-205ENST00000588679 2904 ntBASIC19.31■□□□□ 0.68
PCDH17O14917 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH17O14917 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
PCDH17O14917 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH17O14917 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDH17O14917 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDH17O14917 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH17O14917 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDH17O14917 CYP2T3P-201ENST00000601990 817 ntBASIC19.31■□□□□ 0.68
PCDH17O14917 AL589743.5-201ENST00000616611 1050 ntBASIC19.31■□□□□ 0.68
PCDH17O14917 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH17O14917 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDH17O14917 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH17O14917 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH17O14917 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH17O14917 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCDH17O14917 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDH17O14917 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
PCDH17O14917 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH17O14917 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
PCDH17O14917 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH17O14917 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDH17O14917 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH17O14917 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH17O14917 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH17O14917 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH17O14917 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH17O14917 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH17O14917 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH17O14917 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH17O14917 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH17O14917 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH17O14917 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH17O14917 PGM5P4-201ENST00000421970 445 ntBASIC19.3■□□□□ 0.68
PCDH17O14917 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCDH17O14917 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.3■□□□□ 0.68
PCDH17O14917 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDH17O14917 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.3■□□□□ 0.68
PCDH17O14917 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH17O14917 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH17O14917 MYC-209ENST00000641252 345 ntBASIC19.3■□□□□ 0.68
PCDH17O14917 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH17O14917 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH17O14917 AC073314.1-201ENST00000568729 2216 ntBASIC19.3■□□□□ 0.68
PCDH17O14917 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH17O14917 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH17O14917 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH17O14917 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH17O14917 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH17O14917 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH17O14917 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH17O14917 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH17O14917 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH17O14917 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDH17O14917 AC091874.3-201ENST00000512672 1195 ntBASIC19.29■□□□□ 0.68
PCDH17O14917 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH17O14917 AP005212.1-201ENST00000581547 1997 ntBASIC19.29■□□□□ 0.68
PCDH17O14917 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH17O14917 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH17O14917 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH17O14917 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH17O14917 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH17O14917 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
PCDH17O14917 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH17O14917 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH17O14917 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PCDH17O14917 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH17O14917 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH17O14917 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH17O14917 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.28■□□□□ 0.68
PCDH17O14917 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH17O14917 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH17O14917 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH17O14917 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH17O14917 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH17O14917 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDH17O14917 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDH17O14917 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH17O14917 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.28■□□□□ 0.68
PCDH17O14917 AC066615.1-201ENST00000640911 628 ntBASIC19.28■□□□□ 0.68
PCDH17O14917 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH17O14917 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH17O14917 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH17O14917 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH17O14917 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH17O14917 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH17O14917 GABARAPL3-202ENST00000624044 1851 ntBASIC19.28■□□□□ 0.68
PCDH17O14917 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH17O14917 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH17O14917 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH17O14917 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDH17O14917 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH17O14917 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH17O14917 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms