Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CHD1O14646 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC33.28■■■□□ 2.92
CHD1O14646 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
CHD1O14646 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC33.28■■■□□ 2.92
CHD1O14646 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC33.28■■■□□ 2.92
CHD1O14646 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC33.28■■■□□ 2.92
CHD1O14646 TSPY14P-201ENST00000303979 915 ntBASIC33.28■■■□□ 2.92
CHD1O14646 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC33.28■■■□□ 2.92
CHD1O14646 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC33.28■■■□□ 2.92
CHD1O14646 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC33.27■■■□□ 2.92
CHD1O14646 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
CHD1O14646 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC33.27■■■□□ 2.92
CHD1O14646 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC33.27■■■□□ 2.92
CHD1O14646 AP005242.2-201ENST00000580065 1175 ntBASIC33.27■■■□□ 2.92
CHD1O14646 DGCR10-201ENST00000609839 495 ntBASIC33.27■■■□□ 2.92
CHD1O14646 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
CHD1O14646 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
CHD1O14646 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC33.26■■■□□ 2.92
CHD1O14646 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC33.26■■■□□ 2.92
CHD1O14646 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC33.26■■■□□ 2.92
CHD1O14646 CD320-202ENST00000537716 1119 ntTSL 2 BASIC33.26■■■□□ 2.92
CHD1O14646 FAM87A-204ENST00000613235 858 ntBASIC33.26■■■□□ 2.92
CHD1O14646 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC33.26■■■□□ 2.92
CHD1O14646 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CHD1O14646 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CHD1O14646 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CHD1O14646 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CHD1O14646 AC026271.3-201ENST00000571884 352 ntBASIC33.25■■■□□ 2.91
CHD1O14646 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CHD1O14646 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC33.25■■■□□ 2.91
CHD1O14646 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CHD1O14646 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC33.25■■■□□ 2.91
CHD1O14646 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CHD1O14646 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC33.25■■■□□ 2.91
CHD1O14646 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CHD1O14646 AC091390.4-202ENST00000476426 537 ntBASIC33.25■■■□□ 2.91
CHD1O14646 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC33.24■■■□□ 2.91
CHD1O14646 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
CHD1O14646 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
CHD1O14646 INGX-201ENST00000359239 846 ntBASIC33.24■■■□□ 2.91
CHD1O14646 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC33.24■■■□□ 2.91
CHD1O14646 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
CHD1O14646 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC33.24■■■□□ 2.91
CHD1O14646 YBX1P2-201ENST00000489612 999 ntBASIC33.24■■■□□ 2.91
CHD1O14646 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC33.24■■■□□ 2.91
CHD1O14646 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC33.24■■■□□ 2.91
CHD1O14646 CLEC4GP1-201ENST00000596555 870 ntBASIC33.24■■■□□ 2.91
CHD1O14646 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CHD1O14646 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CHD1O14646 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC33.24■■■□□ 2.91
CHD1O14646 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC33.24■■■□□ 2.91
CHD1O14646 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
CHD1O14646 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC33.23■■■□□ 2.91
CHD1O14646 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
CHD1O14646 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
CHD1O14646 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC33.23■■■□□ 2.91
CHD1O14646 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CHD1O14646 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
CHD1O14646 MED25-212ENST00000618715 1467 ntTSL 5 BASIC33.23■■■□□ 2.91
CHD1O14646 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC33.23■■■□□ 2.91
CHD1O14646 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC33.23■■■□□ 2.91
CHD1O14646 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
CHD1O14646 SLC25A1P4-201ENST00000567977 778 ntBASIC33.22■■■□□ 2.91
CHD1O14646 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
CHD1O14646 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC33.22■■■□□ 2.91
CHD1O14646 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC33.22■■■□□ 2.91
CHD1O14646 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
CHD1O14646 AC093323.1-202ENST00000635031 2045 ntBASIC33.22■■■□□ 2.91
CHD1O14646 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
CHD1O14646 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC33.22■■■□□ 2.91
CHD1O14646 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC33.22■■■□□ 2.91
CHD1O14646 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC33.22■■■□□ 2.91
CHD1O14646 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
CHD1O14646 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
CHD1O14646 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC33.22■■■□□ 2.91
CHD1O14646 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC33.22■■■□□ 2.91
CHD1O14646 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
CHD1O14646 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHD1O14646 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHD1O14646 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHD1O14646 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC33.21■■■□□ 2.91
CHD1O14646 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHD1O14646 PCED1CP-201ENST00000419887 785 ntBASIC33.21■■■□□ 2.91
CHD1O14646 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC33.21■■■□□ 2.91
CHD1O14646 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHD1O14646 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHD1O14646 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHD1O14646 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC33.2■■■□□ 2.91
CHD1O14646 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CHD1O14646 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CHD1O14646 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC33.2■■■□□ 2.91
CHD1O14646 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC33.2■■■□□ 2.9
CHD1O14646 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
CHD1O14646 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CHD1O14646 AC116407.4-201ENST00000623319 1061 ntBASIC33.19■■■□□ 2.9
CHD1O14646 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC33.19■■■□□ 2.9
CHD1O14646 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC33.19■■■□□ 2.9
CHD1O14646 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC33.19■■■□□ 2.9
CHD1O14646 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CHD1O14646 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC33.19■■■□□ 2.9
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms