Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CFAP99D6REC4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.18■□□□□ 0.82
CFAP99D6REC4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.18■□□□□ 0.82
CFAP99D6REC4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CFAP99D6REC4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CFAP99D6REC4 SLC29A4P1-201ENST00000398760 971 ntBASIC20.18■□□□□ 0.82
CFAP99D6REC4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.18■□□□□ 0.82
CFAP99D6REC4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.18■□□□□ 0.82
CFAP99D6REC4 NCF1B-203ENST00000435988 1254 ntBASIC20.18■□□□□ 0.82
CFAP99D6REC4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.18■□□□□ 0.82
CFAP99D6REC4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CFAP99D6REC4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CFAP99D6REC4 CYP2T3P-201ENST00000601990 817 ntBASIC20.18■□□□□ 0.82
CFAP99D6REC4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.18■□□□□ 0.82
CFAP99D6REC4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CFAP99D6REC4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CFAP99D6REC4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.18■□□□□ 0.82
CFAP99D6REC4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CFAP99D6REC4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CFAP99D6REC4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CFAP99D6REC4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CFAP99D6REC4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CFAP99D6REC4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CFAP99D6REC4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.17■□□□□ 0.82
CFAP99D6REC4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CFAP99D6REC4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CFAP99D6REC4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CFAP99D6REC4 KRT18P68-201ENST00000392293 1000 ntBASIC20.17■□□□□ 0.82
CFAP99D6REC4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.17■□□□□ 0.82
CFAP99D6REC4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.17■□□□□ 0.82
CFAP99D6REC4 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.17■□□□□ 0.82
CFAP99D6REC4 AL356652.1-201ENST00000615962 565 ntBASIC20.17■□□□□ 0.82
CFAP99D6REC4 AL589743.5-201ENST00000616611 1050 ntBASIC20.17■□□□□ 0.82
CFAP99D6REC4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
CFAP99D6REC4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CFAP99D6REC4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.17■□□□□ 0.82
CFAP99D6REC4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.17■□□□□ 0.82
CFAP99D6REC4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP99D6REC4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.16■□□□□ 0.82
CFAP99D6REC4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.16■□□□□ 0.82
CFAP99D6REC4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP99D6REC4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP99D6REC4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.16■□□□□ 0.82
CFAP99D6REC4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP99D6REC4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP99D6REC4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.16■□□□□ 0.82
CFAP99D6REC4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.16■□□□□ 0.82
CFAP99D6REC4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.16■□□□□ 0.82
CFAP99D6REC4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP99D6REC4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.16■□□□□ 0.82
CFAP99D6REC4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.16■□□□□ 0.82
CFAP99D6REC4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.16■□□□□ 0.82
CFAP99D6REC4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP99D6REC4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.16■□□□□ 0.82
CFAP99D6REC4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.16■□□□□ 0.82
CFAP99D6REC4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP99D6REC4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.16■□□□□ 0.82
CFAP99D6REC4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP99D6REC4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.15■□□□□ 0.82
CFAP99D6REC4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP99D6REC4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP99D6REC4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CFAP99D6REC4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP99D6REC4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP99D6REC4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP99D6REC4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.15■□□□□ 0.82
CFAP99D6REC4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CFAP99D6REC4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CFAP99D6REC4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP99D6REC4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP99D6REC4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CFAP99D6REC4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CFAP99D6REC4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.14■□□□□ 0.82
CFAP99D6REC4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP99D6REC4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP99D6REC4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP99D6REC4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP99D6REC4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP99D6REC4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.14■□□□□ 0.81
CFAP99D6REC4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP99D6REC4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CFAP99D6REC4 KRT8P36-201ENST00000489121 1440 ntBASIC20.14■□□□□ 0.81
CFAP99D6REC4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP99D6REC4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.14■□□□□ 0.81
CFAP99D6REC4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
CFAP99D6REC4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP99D6REC4 LSM12P1-201ENST00000411836 588 ntBASIC20.14■□□□□ 0.81
CFAP99D6REC4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.14■□□□□ 0.81
CFAP99D6REC4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP99D6REC4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.14■□□□□ 0.81
CFAP99D6REC4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.14■□□□□ 0.81
CFAP99D6REC4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.14■□□□□ 0.81
CFAP99D6REC4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.14■□□□□ 0.81
CFAP99D6REC4 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.13■□□□□ 0.81
CFAP99D6REC4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.13■□□□□ 0.81
CFAP99D6REC4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.13■□□□□ 0.81
CFAP99D6REC4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP99D6REC4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CFAP99D6REC4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.13■□□□□ 0.81
CFAP99D6REC4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms