Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CENPBD1B2RD01 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPBD1B2RD01 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPBD1B2RD01 AC011484.1-201ENST00000377652 1995 ntBASIC18.39■□□□□ 0.53
CENPBD1B2RD01 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPBD1B2RD01 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPBD1B2RD01 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CENPBD1B2RD01 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CENPBD1B2RD01 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.39■□□□□ 0.53
CENPBD1B2RD01 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.39■□□□□ 0.53
CENPBD1B2RD01 NTF6G-201ENST00000591094 616 ntBASIC18.39■□□□□ 0.53
CENPBD1B2RD01 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CENPBD1B2RD01 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CENPBD1B2RD01 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPBD1B2RD01 GABARAPL3-202ENST00000624044 1851 ntBASIC18.39■□□□□ 0.53
CENPBD1B2RD01 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPBD1B2RD01 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPBD1B2RD01 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CENPBD1B2RD01 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CENPBD1B2RD01 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CENPBD1B2RD01 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CENPBD1B2RD01 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.38■□□□□ 0.53
CENPBD1B2RD01 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CENPBD1B2RD01 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.38■□□□□ 0.53
CENPBD1B2RD01 SLC7A5P2-201ENST00000553010 536 ntBASIC18.38■□□□□ 0.53
CENPBD1B2RD01 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.38■□□□□ 0.53
CENPBD1B2RD01 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CENPBD1B2RD01 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CENPBD1B2RD01 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CENPBD1B2RD01 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CENPBD1B2RD01 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 KRT18P11-201ENST00000435214 1283 ntBASIC18.37■□□□□ 0.53
CENPBD1B2RD01 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPBD1B2RD01 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 KRT18P61-201ENST00000585825 1298 ntBASIC18.36■□□□□ 0.53
CENPBD1B2RD01 AC087623.3-201ENST00000607047 1098 ntBASIC18.36■□□□□ 0.53
CENPBD1B2RD01 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CENPBD1B2RD01 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 AC007225.1-201ENST00000566331 1836 ntBASIC18.35■□□□□ 0.53
CENPBD1B2RD01 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPBD1B2RD01 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms