Protein–RNA interactions for Protein: A6NI56

CCDC154, Coiled-coil domain-containing protein 154, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC154A6NI56 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC154A6NI56 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC154A6NI56 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC154A6NI56 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC154A6NI56 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC154A6NI56 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 AC105265.2-201ENST00000467189 838 ntBASIC19.41■□□□□ 0.7
CCDC154A6NI56 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC154A6NI56 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC154A6NI56 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC154A6NI56 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC154A6NI56 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC154A6NI56 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC154A6NI56 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC154A6NI56 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC154A6NI56 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
CCDC154A6NI56 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC154A6NI56 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC154A6NI56 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC154A6NI56 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC154A6NI56 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC154A6NI56 AC027612.3-201ENST00000413684 1047 ntBASIC19.4■□□□□ 0.7
CCDC154A6NI56 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC154A6NI56 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC154A6NI56 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC154A6NI56 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC154A6NI56 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC154A6NI56 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC154A6NI56 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC154A6NI56 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC154A6NI56 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC154A6NI56 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC154A6NI56 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC154A6NI56 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC154A6NI56 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC154A6NI56 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC154A6NI56 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CCDC154A6NI56 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC154A6NI56 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC154A6NI56 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC154A6NI56 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC154A6NI56 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC154A6NI56 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC154A6NI56 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC154A6NI56 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC154A6NI56 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC154A6NI56 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC154A6NI56 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC154A6NI56 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CCDC154A6NI56 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC154A6NI56 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC154A6NI56 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC154A6NI56 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC154A6NI56 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC154A6NI56 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC154A6NI56 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC154A6NI56 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC154A6NI56 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC154A6NI56 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC154A6NI56 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC154A6NI56 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC154A6NI56 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC154A6NI56 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC154A6NI56 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC154A6NI56 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC154A6NI56 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC154A6NI56 AC010141.2-201ENST00000452426 721 ntBASIC19.38■□□□□ 0.69
CCDC154A6NI56 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC154A6NI56 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC154A6NI56 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC154A6NI56 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC154A6NI56 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.38■□□□□ 0.69
CCDC154A6NI56 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC154A6NI56 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
CCDC154A6NI56 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC154A6NI56 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC154A6NI56 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC154A6NI56 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC154A6NI56 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC154A6NI56 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC154A6NI56 AC087289.5-201ENST00000586076 3175 ntBASIC19.37■□□□□ 0.69
CCDC154A6NI56 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC154A6NI56 LINC02228-203ENST00000641970 1355 ntBASIC19.37■□□□□ 0.69
CCDC154A6NI56 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC154A6NI56 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC154A6NI56 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC154A6NI56 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms